4co1

Structure of PII signaling protein GlnZ from Azospirillum brasilense in complex with adenosine diphosphate

spinqualitylabelsall models 4co1, resolution 1.50Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 4co1 is a 2 chain structure with sequence from Azospirillum brasilense. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Ligands: ADP Related: 4cny, 4cnz, 4co0, 4co2, 4co3, 4co4, 4co5, 3mhy Resources: FirstGlance, OCA, RCSB, PDBsum Publication Abstract from PubMed The trimeric PII signal transduction proteins regulate the function of a variety of target proteins predominantly involved in nitrogen metabolism. ATP, ADP and 2-oxoglutarate are key effector molecules influencing PII binding to targets. Studies of PII proteins have established that the 20-residue T-loop plays a central role in effector sensing and target binding. However, the specific effects of effector binding on T-loop conformation have remained poorly documented. We present eight crystal stuctures of the Azospirillum brasilense PII protein GlnZ, six of which are cocrystallized and liganded with ADP or ATP. We find that interaction with the diphosphate moiety of bound ADP constrains the N-terminal part of the T-loop in a characteristic way which is maintained in ADP-promoted complexes with target proteins. In contrast, the interactions with the triphosphate moiety in ATP complexes are much more variable and no single predominant interaction mode is apparent except for the ternary MgATP/2-OG complex. These conclusions can be extended to most investigated PII proteins of the GlnB/GlnK subfamily. Unlike reported for other PII proteins, microcalorimetry reveals no cooperativity between the three binding sites of GlnZ trimers for any of the three effectors under carefully controlled experimental conditions. Structure and thermodynamics of effector molecule binding to the nitrogen signal transduction P protein GlnZ from Azospirillum brasilense.,Truan D, Bjelic S, Li XD, Winkler FK J Mol Biol. 2014 May 17. pii: S0022-2836(14)00247-2. doi:, 10.1016/j.jmb.2014.05.008. PMID:24846646 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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