3g4v: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3g4v]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Scapharca_inaequivalvis Scapharca inaequivalvis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G4V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3G4V FirstGlance]. <br> | <table><tr><td colspan='2'>[[3g4v]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Scapharca_inaequivalvis Scapharca inaequivalvis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G4V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3G4V FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=7CL:1-CHLOROPENTANE'>7CL</scene>, <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>< | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=7CL:1-CHLOROPENTANE'>7CL</scene>, <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr> | ||
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4sdh|4sdh]], [[3sdh|3sdh]], [[3g4q|3g4q]], [[3g4r|3g4r]], [[3g4u|3g4u]], [[3g46|3g46]], [[3g4w|3g4w]], [[3g4y|3g4y]], [[3g52|3g52]], [[3g53|3g53]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4sdh|4sdh]], [[3sdh|3sdh]], [[3g4q|3g4q]], [[3g4r|3g4r]], [[3g4u|3g4u]], [[3g46|3g46]], [[3g4w|3g4w]], [[3g4y|3g4y]], [[3g52|3g52]], [[3g53|3g53]]</td></tr> | ||
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HBI ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6561 Scapharca inaequivalvis])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HBI ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6561 Scapharca inaequivalvis])</td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3g4v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g4v OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3g4v RCSB], [http://www.ebi.ac.uk/pdbsum/3g4v PDBsum]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3g4v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g4v OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3g4v RCSB], [http://www.ebi.ac.uk/pdbsum/3g4v PDBsum]</span></td></tr> | ||
<table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 34: | Line 34: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Scapharca inaequivalvis]] | [[Category: Scapharca inaequivalvis]] | ||
[[Category: Cohen, J | [[Category: Cohen, J]] | ||
[[Category: Gibson, Q H | [[Category: Gibson, Q H]] | ||
[[Category: Knapp, J E | [[Category: Knapp, J E]] | ||
[[Category: Nichols, J C | [[Category: Nichols, J C]] | ||
[[Category: Pahl, R | [[Category: Pahl, R]] | ||
[[Category: Royer, W E | [[Category: Royer, W E]] | ||
[[Category: Schulten, K | [[Category: Schulten, K]] | ||
[[Category: Srajer, V | [[Category: Srajer, V]] | ||
[[Category: Allostery]] | [[Category: Allostery]] | ||
[[Category: Heme]] | [[Category: Heme]] | ||
Revision as of 11:48, 20 January 2015
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and chloropentane bound to the XE4 cavity
| ||||||||||||
