3h2k: Difference between revisions

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==Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae==
==Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae==
<StructureSection load='3h2k' size='340' side='right' caption='[[3h2k]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='3h2k' size='340' side='right' caption='[[3h2k]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3h2k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3H2K FirstGlance]. <br>
<table><tr><td colspan='2'>[[3h2k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanoo Xanoo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3H2K FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3h2g|3h2g]], [[3h2h|3h2h]], [[3h2i|3h2i]], [[3h2j|3h2j]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3h2g|3h2g]], [[3h2h|3h2h]], [[3h2i|3h2i]], [[3h2j|3h2j]]</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LipA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=64187 Xanthomonas oryzae pv. oryzae])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LipA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=64187 XANOO])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3h2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h2k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3h2k RCSB], [http://www.ebi.ac.uk/pdbsum/3h2k PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3h2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h2k OCA], [http://pdbe.org/3h2k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3h2k RCSB], [http://www.ebi.ac.uk/pdbsum/3h2k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3h2k ProSAT]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h2k ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
<div class="pdbe-citations 3h2k" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Xanthomonas oryzae pv. oryzae]]
[[Category: Xanoo]]
[[Category: Aparna, G]]
[[Category: Aparna, G]]
[[Category: Chatterjee, A]]
[[Category: Chatterjee, A]]
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[[Category: Rice]]
[[Category: Rice]]
[[Category: Virulence]]
[[Category: Virulence]]
[[Category: Xanthomonas oryzae pv. oryzae]]