4qcb: Difference between revisions

Line 1:

'''~~Unreleased structure~~'''

==Protein-DNA complex of Vaccinia virus D4 with double-stranded non-specific DNA==

~~The entry~~ 4qcb is ~~ON HOLD until Nov 11 2016~~

== Structural highlights ==

<table><tr><td colspan='2'>[[4qcb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QCB OCA]. For a guided tour on the structure components use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QCB FirstGlance].

~~Authors~~: ~~Schormann~~, N., ~~Banerjee~~, S., ~~Ricciardi~~, R., ~~Chattopadhyay~~, D.

</td></tr><tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>

~~Description: Protein-DNA complex of Vaccinia virus D4 with double-stranded non-specific DNA~~

<tr id='activity'><td class="sblockLbl">Activity:</td><td class="sblockDat">[http://en.wikipedia.org/wiki/Uracil-DNA_glycosylase Uracil-DNA glycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.27 3.2.2.27] </td></tr>

[[~~Category~~: ~~Unreleased Structures~~]]

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qcb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qcb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qcb RCSB], [http://www.ebi.ac.uk/pdbsum/4qcb PDBsum]</td></tr>

[[Category: ~~Schormann, N~~]]

</table>

== Function ==

[[http://www.uniprot.org/uniprot/UNG_VACCW UNG_VACCW]] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. Also part of a heterodimeric processivity factor which potentiates the DNA polymerase activity. Binds to DNA (By similarity).

__TOC__

</StructureSection>

[[Category: Uracil-DNA glycosylase]]

[[Category: Banerjee, S]]

[[Category: Chattopadhyay, D]]

[[Category: Ricciardi, R]]

[[Category: ~~Chattopadhyay~~, D]]

[[Category: Schormann, N]]

[[Category: A20]]

[[Category: Component of processivity factor]]

[[Category: Dna repair enzyme]]

[[Category: Hydrolase-dna complex]]

[[Category: Poxvirus]]

Navigation menu

Page actions

Page actions

Personal tools

Navigation

Search

Tools

@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
+==Protein-DNA complex of Vaccinia virus D4 with double-stranded non-specific DNA==
+<StructureSection load='4qcb' size='340' side='right' caption='[[4qcb]], [[Resolution|resolution]] 2.89&Aring;' scene=''>
-The entry 4qcb is ON HOLD  until Nov 11 2016
+== Structural highlights ==
+<table><tr><td colspan='2'>[[4qcb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QCB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QCB FirstGlance]. <br>
-Authors: Schormann, N., Banerjee, S., Ricciardi, R., Chattopadhyay, D.
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4dof|4dof]], [[4dog|4dog]], [[4lzb|4lzb]], [[4qc9|4qc9]], [[4qca|4qca]]</td></tr>
-Description: Protein-DNA complex of Vaccinia virus D4 with double-stranded non-specific DNA
+<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uracil-DNA_glycosylase Uracil-DNA glycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.27 3.2.2.27] </span></td></tr>
-[[Category: Unreleased Structures]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qcb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qcb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qcb RCSB], [http://www.ebi.ac.uk/pdbsum/4qcb PDBsum]</span></td></tr>
-[[Category: Schormann, N]]
+</table>
+== Function ==
+[[http://www.uniprot.org/uniprot/UNG_VACCW UNG_VACCW]] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. Also part of a heterodimeric processivity factor which potentiates the DNA polymerase activity. Binds to DNA (By similarity).
+__TOC__
+</StructureSection>
+[[Category: Uracil-DNA glycosylase]]
 [[Category: Banerjee, S]]
+[[Category: Chattopadhyay, D]]
 [[Category: Ricciardi, R]]
-[[Category: Chattopadhyay, D]]
+[[Category: Schormann, N]]
+[[Category: A20]]
+[[Category: Component of processivity factor]]
+[[Category: Dna repair enzyme]]
+[[Category: Hydrolase-dna complex]]
+[[Category: Poxvirus]]