User:Wayne Decatur/kink-turn motif: Difference between revisions
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* The human spliceosomal and small nucleolar RNA-binding 15.5kD protein bound to the kink-turn of a U4 spliceosomal RNA fragment ([[1e7k]])<ref name="u4xstal">PMID: 11163207</ref>. The fact both the box C/D small nucleolar RNAs and the spliceosomal U4 RNA share this motif, and in fact bind the same protein, was observed<ref>PMID: 11081632</ref><ref name="u4xstal" /> even before the kink-turn was shown to be a widespread [[RNA motifs|RNA motif]]. | * The human spliceosomal and small nucleolar RNA-binding 15.5kD protein bound to the kink-turn of a U4 spliceosomal RNA fragment ([[1e7k]])<ref name="u4xstal">PMID: 11163207</ref>. The fact both the box C/D small nucleolar RNAs and the spliceosomal U4 RNA share this motif, and in fact bind the same protein, was observed<ref>PMID: 11081632</ref><ref name="u4xstal" /> even before the kink-turn was shown to be a widespread [[RNA motifs|RNA motif]]. | ||
* The <scene name='User:Wayne_Decatur/kink-turn_motif/Proteincolored/1'>box C/D RNP</scene> from ''Sulfolobus solfataricus'' has two kink-turns that are bound by L7Ae ([[3pla]])<ref>PMID: 21270896</ref>. {{Link Toggle FancyCartoonHighQualityView}}. | * The <scene name='User:Wayne_Decatur/kink-turn_motif/Proteincolored/1'>box C/D RNP</scene> from ''Sulfolobus solfataricus'' has two kink-turns that are bound by L7Ae ([[3pla]])<ref>PMID: 21270896</ref>. {{Link Toggle FancyCartoonHighQualityView}}. | ||
* ''A. fulgidus'' small ribonucleoprotein particle box C/D RNA has a kink-turn that is bound by L7Ae ([[1rlg]])<ref>PMID: 15130473</ref> | * ''A. fulgidus'' small ribonucleoprotein particle box C/D RNA has a kink-turn that is bound by L7Ae ([[1rlg]])<ref>PMID: 15130473</ref>. | ||
* ''Pyrococcus furiosus'' small ribonucleoprotein particle box H/ACA RNA ([[2hvy]]<ref>PMID: 16943774</ref>,[[3hax]],[[3hay]]<ref>PMID: 19481523</ref>) has a kink turn that is bound directly by L7ae in a complex of several proteins. | * ''Pyrococcus furiosus'' small ribonucleoprotein particle box H/ACA RNA ([[2hvy]]<ref>PMID: 16943774</ref>,[[3hax]],[[3hay]]<ref>PMID: 19481523</ref>) has a kink turn that is bound directly by L7ae in a complex of several proteins. | ||
* In the ''Pyrococcus furiosus'' small ribonucleoprotein particle structure a box C/D RNA has two kink-turns bound by L7Ae ([[3nvm]], [[3nvk]], [[3nvi]], and [[3nvu]])<ref>PMID: 20864039</ref>. | |||
* L7Ae protein as a subunit of archaeal RNase P binds to two kink-turns in the ''Pyrococcus furiosus'' RNase P RNA<ref>PMID: 25361963</ref>, <ref>PMID: 20675586</ref> | * L7Ae protein as a subunit of archaeal RNase P binds to two kink-turns in the ''Pyrococcus furiosus'' RNase P RNA<ref>PMID: 25361963</ref>, <ref>PMID: 20675586</ref> | ||
* [[Azoarcus group I intron]]: | * [[Azoarcus group I intron]]: | ||
