2ijr: Difference between revisions

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==Crystal structure of a protein api92 from Yersinia pseudotuberculosis, Pfam DUF1281==

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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>

<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">api92 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=633 "Bacillus pseudotuberkulosis" (sic) Pfeiffer 1889])</td></tr>

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ijr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ijr OCA], [http://pdbe.org/2ijr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ijr RCSB], [http://www.ebi.ac.uk/pdbsum/2ijr PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2ijr TOPSAN]</span></td></tr>

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ijr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ijr OCA], [http://pdbe.org/2ijr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ijr RCSB], [http://www.ebi.ac.uk/pdbsum/2ijr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ijr ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/2ijr TOPSAN]</span></td></tr>

</table>

== Evolutionary Conservation ==

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Check<jmol>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ij/2ijr_consurf.spt"</scriptWhenChecked>

<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ij/2ijr_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ijr ConSurf].

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 ==Crystal structure of a protein api92 from Yersinia pseudotuberculosis, Pfam DUF1281==
 <StructureSection load='2ijr' size='340' side='right' caption='[[2ijr]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
@@ Line 5: / Line 6: @@
 </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">api92 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=633 "Bacillus pseudotuberkulosis" (sic) Pfeiffer 1889])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ijr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ijr OCA], [http://pdbe.org/2ijr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ijr RCSB], [http://www.ebi.ac.uk/pdbsum/2ijr PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2ijr TOPSAN]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ijr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ijr OCA], [http://pdbe.org/2ijr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ijr RCSB], [http://www.ebi.ac.uk/pdbsum/2ijr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ijr ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/2ijr TOPSAN]</span></td></tr>
 </table>
 == Evolutionary Conservation ==
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 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ij/2ijr_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ij/2ijr_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ijr ConSurf].
 <div style="clear:both"></div>
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