2c04: Difference between revisions

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==GMPPCP complex of SRP GTPase Ffh NG Domain at ultra-high resolution==

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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GCP:PHOSPHOMETHYLPHOSPHONIC+ACID+GUANYLATE+ESTER'>GCP</scene></td></tr>

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c04 OCA], [http://pdbe.org/2c04 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2c04 RCSB], [http://www.ebi.ac.uk/pdbsum/2c04 PDBsum]</span></td></tr>

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c04 OCA], [http://pdbe.org/2c04 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2c04 RCSB], [http://www.ebi.ac.uk/pdbsum/2c04 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2c04 ProSAT]</span></td></tr>

</table>

== Evolutionary Conservation ==

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Check<jmol>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c0/2c04_consurf.spt"</scriptWhenChecked>

<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c0/2c04_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2c04 ConSurf].

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 ==GMPPCP complex of SRP GTPase Ffh NG Domain at ultra-high resolution==
 <StructureSection load='2c04' size='340' side='right' caption='[[2c04]], [[Resolution|resolution]] 1.15&Aring;' scene=''>
@@ Line 5: / Line 6: @@
 </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GCP:PHOSPHOMETHYLPHOSPHONIC+ACID+GUANYLATE+ESTER'>GCP</scene></td></tr>
 <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ffh|1ffh]], [[1jpj|1jpj]], [[1jpn|1jpn]], [[1ls1|1ls1]], [[1ng1|1ng1]], [[1o87|1o87]], [[1okk|1okk]], [[1rj9|1rj9]], [[1ry1|1ry1]], [[2bqs|2bqs]], [[2bqt|2bqt]], [[2c03|2c03]], [[2ffh|2ffh]], [[2ng1|2ng1]], [[3ng1|3ng1]]</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c04 OCA], [http://pdbe.org/2c04 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2c04 RCSB], [http://www.ebi.ac.uk/pdbsum/2c04 PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c04 OCA], [http://pdbe.org/2c04 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2c04 RCSB], [http://www.ebi.ac.uk/pdbsum/2c04 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2c04 ProSAT]</span></td></tr>
 </table>
 == Evolutionary Conservation ==
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 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c0/2c04_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c0/2c04_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2c04 ConSurf].
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