4z5v: Difference between revisions

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'''Unreleased structure'''
==Crystal Structure of MHV ns2 PDE Domain==
<StructureSection load='4z5v' size='340' side='right' caption='[[4z5v]], [[Resolution|resolution]] 3.05&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[4z5v]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Z5V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Z5V FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4z5v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4z5v OCA], [http://pdbe.org/4z5v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4z5v RCSB], [http://www.ebi.ac.uk/pdbsum/4z5v PDBsum]</span></td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/NS2A_CVMA5 NS2A_CVMA5]] Not essential for virus replication in transformed murine cells.
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Prior studies have demonstrated that the mouse hepatitis virus A59 strain (MHV-A59) ns2 protein is a member of the 2H phosphoesterase family and exhibits 2',5'-phosphodiesterase (2',5'-PDE) activity. During the interferon antiviral response, ns2 cleaves 2',5'-oligoadenylate (2-5A), a key mediator of RNase L activation, thereby subverting the activation of RNase L and evading host innate immunity. However, the mechanism of 2-5A cleavage by ns2 remains unclear. Here, we present the crystal structure of the MHV ns2 PDE domain and demonstrate a PDE fold similar to that of the cellular protein, a kinase anchoring protein 7 central domain (AKAP7CD) and rotavirus VP3 carboxy-terminal domain (VP3-CTD). The structure displays a pair of strictly conserved HxS/Tx motifs and forms a deep positively charged catalytic groove with beta-sheets and an arginine containing loop (R-loop). These findings provide insight into the structural basis for 2-5A binding of MHV ns2.


The entry 4z5v is ON HOLD  until Paper Publication
Crystal structure of the mouse hepatitis virus ns2 phosphodiesterase domain that antagonizes RNase L activation.,Sui B, Huang J, Jha BK, Yin P, Zhou M, Fu ZF, Silverman RH, Weiss SR, Peng G, Zhao L J Gen Virol. 2016 Jan 12. doi: 10.1099/jgv.0.000395. PMID:26757803<ref>PMID:26757803</ref>


Authors: Sui, B.K., Huang, J.H., Peng, G.Q., Zhao, L.
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
</div>
Description: Crystal Structure of MHV ns2 PDE Domain
<div class="pdbe-citations 4z5v" style="background-color:#fffaf0;"></div>
[[Category: Unreleased Structures]]
== References ==
[[Category: Peng, G.Q]]
<references/>
[[Category: Sui, B.K]]
__TOC__
[[Category: Huang, J.H]]
</StructureSection>
[[Category: Huang, J H]]
[[Category: Peng, G Q]]
[[Category: Sui, B K]]
[[Category: Zhao, L]]
[[Category: Zhao, L]]
[[Category: Murine hepatitis virus]]
[[Category: Ns2 protein]]
[[Category: Phosphodiesterase]]
[[Category: Viral protein]]

Revision as of 17:16, 10 February 2016

Crystal Structure of MHV ns2 PDE Domain

4z5v, resolution 3.05Å

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