User:Wayne Decatur/Code for Molecular Structure and Visualization Work: Difference between revisions
From Proteopedia
Jump to navigationJump to search
mNo edit summary |
m add Dockerfiles I have made for molecular structure work |
||
| Line 18: | Line 18: | ||
==Webserver== | ==Webserver for Python code== | ||
* Much of the more involved code featured | * Much of the more involved code featured for Spartan_Fixer is running in a webserver form [http://fomightez.pythonanywhere.com/spartan_fixer/ here]. You can enter your data and have it analyzed without needing to download anything. | ||
==Code== | ==Obtaining the Python Code== | ||
See [http://fomightez.github.io/ here] for getting my code in a form you can use on your machine or that you can modify. | See [http://fomightez.github.io/ here] for getting my code in a form you can use on your machine or that you can modify. | ||
==Dockerfiles== | |||
* [https://github.com/fomightez/cnssolve1pt21_docker Dockerfile] to build images that will compile CNSsolve 1.21. A modified version of CNS to run the scripts for XL-MS Protein assembly, that software is referred to as XL-MOD in the publication [https://www.ncbi.nlm.nih.gov/pubmed/27111507 here]. | |||
* [https://github.com/fomightez/xlmod_docker Dockerfile] for a modified version of CNS to run the scripts for XL-MS Protein assembly, that software is referred to as XL-MOD in the publication [https://www.ncbi.nlm.nih.gov/pubmed/27111507 here]. | |||