1dxa: Difference between revisions

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[[Image:1dxa.gif|left|200px]]
[[Image:1dxa.gif|left|200px]]


{{Structure
<!--
|PDB= 1dxa |SIZE=350|CAPTION= <scene name='initialview01'>1dxa</scene>
The line below this paragraph, containing "STRUCTURE_1dxa", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=BAP:1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE'>BAP</scene>, <scene name='pdbligand=DA:2&#39;-DEOXYADENOSINE-5&#39;-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2&#39;-DEOXYCYTIDINE-5&#39;-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=  
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|GENE=  
-->
|DOMAIN=
{{STRUCTURE_1dxa| PDB=1dxa  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dxa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dxa OCA], [http://www.ebi.ac.uk/pdbsum/1dxa PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1dxa RCSB]</span>
}}


'''BENZO[A]PYRENE DIOL EPOXIDE ADDUCT OF DA IN DUPLEX DNA'''
'''BENZO[A]PYRENE DIOL EPOXIDE ADDUCT OF DA IN DUPLEX DNA'''
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==About this Structure==
==About this Structure==
1DXA is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DXA OCA].  
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DXA OCA].  


==Reference==
==Reference==
NMR solution structure of a nonanucleotide duplex with a dG mismatch opposite a 10S adduct derived from trans addition of a deoxyadenosine N6-amino group to (+)-(7R,8S,9S,10R)-7,8-dihydroxy-9,10-epoxy-7,8,9,10- tetrahydrobenzo[a]pyrene: an unusual syn glycosidic torsion angle at the modified dA., Yeh HJ, Sayer JM, Liu X, Altieri AS, Byrd RA, Lakshman MK, Yagi H, Schurter EJ, Gorenstein DG, Jerina DM, Biochemistry. 1995 Oct 17;34(41):13570-81. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/7577946 7577946]
NMR solution structure of a nonanucleotide duplex with a dG mismatch opposite a 10S adduct derived from trans addition of a deoxyadenosine N6-amino group to (+)-(7R,8S,9S,10R)-7,8-dihydroxy-9,10-epoxy-7,8,9,10- tetrahydrobenzo[a]pyrene: an unusual syn glycosidic torsion angle at the modified dA., Yeh HJ, Sayer JM, Liu X, Altieri AS, Byrd RA, Lakshman MK, Yagi H, Schurter EJ, Gorenstein DG, Jerina DM, Biochemistry. 1995 Oct 17;34(41):13570-81. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/7577946 7577946]
[[Category: Protein complex]]
[[Category: Altieri, A S.]]
[[Category: Altieri, A S.]]
[[Category: Byrd, R A.]]
[[Category: Byrd, R A.]]
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[[Category: Yagi, H.]]
[[Category: Yagi, H.]]
[[Category: Yeh, H J.C.]]
[[Category: Yeh, H J.C.]]
[[Category: benzo[a]pyrene diol epoxide adduct]]
[[Category: Double helix]]
[[Category: double helix]]
[[Category: Duplex dna]]
[[Category: duplex dna]]
[[Category: Nmr]]
[[Category: nmr]]
[[Category: Non-watson-crick base pair]]
[[Category: non-watson-crick base pair]]
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Retrieved from "https://proteopedia.org/1dxa"