4yb4: Difference between revisions
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==Crystal structure of homoisocitrate dehydrogenase from Thermus thermophilus in complex with homoisocitrate, magnesium ion (II) and NADH== | ==Crystal structure of homoisocitrate dehydrogenase from Thermus thermophilus in complex with homoisocitrate, magnesium ion (II) and NADH== | ||
<StructureSection load='4yb4' size='340' side='right' caption='[[4yb4]], [[Resolution|resolution]] 2.50Å' scene=''> | <StructureSection load='4yb4' size='340' side='right'caption='[[4yb4]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4yb4]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YB4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YB4 FirstGlance]. <br> | <table><tr><td colspan='2'>[[4yb4]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet2 Thet2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YB4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YB4 FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=48Y:(1R,2S)-1-HYDROXYBUTANE-1,2,4-TRICARBOXYLIC+ACID'>48Y</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=48Y:(1R,2S)-1-HYDROXYBUTANE-1,2,4-TRICARBOXYLIC+ACID'>48Y</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hicd, hdh, hicdh, TT_C1012 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=262724 THET2])</td></tr> | |||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Homoisocitrate_dehydrogenase Homoisocitrate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.87 1.1.1.87] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Homoisocitrate_dehydrogenase Homoisocitrate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.87 1.1.1.87] </span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yb4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yb4 OCA], [http://pdbe.org/4yb4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yb4 RCSB], [http://www.ebi.ac.uk/pdbsum/4yb4 PDBsum]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yb4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yb4 OCA], [http://pdbe.org/4yb4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yb4 RCSB], [http://www.ebi.ac.uk/pdbsum/4yb4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4yb4 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| Line 15: | Line 16: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Homoisocitrate dehydrogenase]] | [[Category: Homoisocitrate dehydrogenase]] | ||
[[Category: Large Structures]] | |||
[[Category: Thet2]] | |||
[[Category: Kuzuyama, T]] | [[Category: Kuzuyama, T]] | ||
[[Category: Nishiyama, M]] | [[Category: Nishiyama, M]] | ||
