User:Daniel Schemenauer/Sandbox 1: Difference between revisions

From Proteopedia
Jump to navigationJump to search
No edit summary
No edit summary
Line 16: Line 16:
The structure of mGlu<sub>5</sub> bound to the NAM [https://en.wikipedia.org/wiki/Mavoglurant Mavoglurant] demonstrates how protein activity is decreased through drug interactions.   
The structure of mGlu<sub>5</sub> bound to the NAM [https://en.wikipedia.org/wiki/Mavoglurant Mavoglurant] demonstrates how protein activity is decreased through drug interactions.   
<scene name='72/726404/Scene_7/6'>Mavoglurant</scene> binds within the allosteric binding site in the core of the seven trans-membrane α-helices, having passed through the restricted entrance formed by the <scene name='72/726409/Mavoglurant_overview2/5'>ECL2</scene>.  Bound Mavoglurant forms multiple interactions with the protein that further stabilize the inactive conformation.  
<scene name='72/726404/Scene_7/6'>Mavoglurant</scene> binds within the allosteric binding site in the core of the seven trans-membrane α-helices, having passed through the restricted entrance formed by the <scene name='72/726409/Mavoglurant_overview2/5'>ECL2</scene>.  Bound Mavoglurant forms multiple interactions with the protein that further stabilize the inactive conformation.  
The bicyclic ring system of the drug is surrounded by a pocket of mainly hydrophobic residues including Val 806, Met 802, Phe 788, Trp 785, Leu 744, Ile 651, Pro 655, and Asn 747 (Figure 1).<ref name="Primary">PMID: 25042998 </ref>  The carbamate tail of Mavoglurant forms a hydrogen bond through its carbonyl oxygen to the amide side-chain of Asparagine 747 of TM4 (Figure 2). A hydroxyl group similarly forms hydrogen bonds to mGlu<sub>5</sub>, specifically at two serine residues (S805 and S809) of TM7.  These residues form a hydrogen bonding network to other residues through their main chain atoms and a coordinated water molecule (omitted for clarity) (Figure 3). The interactions between Mavoglurant and mGlu<sub>5</sub> involve TM helices that were not previously stabilized by any strong interactions, introducing a new level of stability that favors the inactive conformation of the protein and hence decreases the overall activity of mGlu<sub>5</sub>.<ref name="Primary">PMID: 25042998 </ref>   
The bicyclic ring system of the drug is surrounded by a pocket of mainly hydrophobic residues including Val 806, Met 802, Phe 788, Trp 785, Leu 744, Ile 651, Pro 655, and Asn 747 (Figure 1).<ref name="Primary">PMID: 25042998 </ref>  The carbamate tail of Mavoglurant forms a hydrogen bond through its carbonyl oxygen to the amide side-chain of Asparagine 747 of TM4 (Figure 2). A hydroxyl group similarly forms hydrogen bonds to mGlu<sub>5</sub>, specifically at two serine residues (S805 and S809) of TM7.  These residues form a hydrogen bonding network to other residues through their main chain atoms and a coordinated water molecule. The interactions between Mavoglurant and mGlu<sub>5</sub> involve TM helices that were not previously stabilized by any strong interactions, introducing a new level of stability that favors the inactive conformation of the protein and hence decreases the overall activity of mGlu<sub>5</sub>.<ref name="Primary">PMID: 25042998 </ref>   


Mavoglurant was met by disappointing Fragile X Syndrome trial results and ultimately discontinued for Fragile X Syndrome in 2014, but testing for dyskinesia and [https://en.wikipedia.org/wiki/Obsessive%E2%80%93compulsive_disorder Obsessive-compulsive disorder] are still in progress. [https://en.wikipedia.org/wiki/Basimglurant Basimglurant] and [https://en.wikipedia.org/wiki/MTEP MTEP] are inhibitors that are similar to Mavoglurant as they both function as negative allosteric modulators to mGlu<sub>5</sub>, and they are currently under trials to serve as medications for depression.<ref name="Clinical">PMID: 26219727 </ref><ref name=”Clinical2”>PMID: 25043733 </ref>
Mavoglurant was met by disappointing Fragile X Syndrome trial results and ultimately discontinued for Fragile X Syndrome in 2014, but testing for dyskinesia and [https://en.wikipedia.org/wiki/Obsessive%E2%80%93compulsive_disorder Obsessive-compulsive disorder] are still in progress. [https://en.wikipedia.org/wiki/Basimglurant Basimglurant] and [https://en.wikipedia.org/wiki/MTEP MTEP] are inhibitors that are similar to Mavoglurant as they both function as negative allosteric modulators to mGlu<sub>5</sub>, and they are currently under trials to serve as medications for depression.<ref name="Clinical">PMID: 26219727 </ref><ref name=”Clinical2”>PMID: 25043733 </ref>

Revision as of 22:34, 17 April 2016

metabotropic Glutamate Receptor 5 PDB:4oo9

Drag the structure with the mouse to rotate

References

Proteopedia Page Contributors and Editors (what is this?)

Daniel Schemenauer