5e1i: Difference between revisions
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==Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 2 with carbapenem drug T210== | |||
<StructureSection load='5e1i' size='340' side='right' caption='[[5e1i]], [[Resolution|resolution]] 2.00Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[5e1i]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5E1I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5E1I FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6B8:(2S,3R,4R)-2-[(2S,3R)-3-HYDROXY-1-OXOBUTAN-2-YL]-3-METHYL-4-(METHYLSULFANYL)-3,4-DIHYDRO-2H-PYRROLE-5-CARBOXYLIC+ACID'>6B8</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | |||
[[Category: | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5e1g|5e1g]], [[5dzp|5dzp]], [[5dzj|5dzj]]</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5e1i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5e1i OCA], [http://pdbe.org/5e1i PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5e1i RCSB], [http://www.ebi.ac.uk/pdbsum/5e1i PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5e1i ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[[http://www.uniprot.org/uniprot/LDT2_MYCTU LDT2_MYCTU]] Generates 3->3 cross-links in peptidoglycan, catalyzing the cleavage of the mDap(3)-D-Ala(4) bond of a tetrapeptide donor stem and the formation of a bond between the carbonyl of mDap(3) of the donor stem and the side chain of mDap(3) of the acceptor stem. Is specific for donor substrates containing a stem tetrapeptide since it cannot use pentapeptide stems.<ref>PMID:24041897</ref> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Ginell, S L]] | |||
[[Category: Kumar, P]] | [[Category: Kumar, P]] | ||
[[Category: Lamichhane, G]] | [[Category: Lamichhane, G]] | ||
[[Category: Cell wall enzyme]] | |||
[[Category: Peptidoglycan synthesis enzyme]] | |||
[[Category: Transferase]] | |||
Revision as of 17:37, 19 October 2016
Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 2 with carbapenem drug T210
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