3omd: Difference between revisions

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==Crystal structure of unknown function protein from Leptospirillum rubarum==
==Crystal structure of unknown function protein from Leptospirillum rubarum==
<StructureSection load='3omd' size='340' side='right' caption='[[3omd]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='3omd' size='340' side='right'caption='[[3omd]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3omd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"leptospirillum_rubarum"_aliaga_goltsman_et_al._2009 "leptospirillum rubarum" aliaga goltsman et al. 2009]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OMD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OMD FirstGlance]. <br>
<table><tr><td colspan='2'>[[3omd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Leptospirillum_rubarum Leptospirillum rubarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OMD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OMD FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">UBAL2_82410030 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=419542 "Leptospirillum rubarum" Aliaga Goltsman et al. 2009])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3omd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3omd OCA], [http://pdbe.org/3omd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3omd RCSB], [http://www.ebi.ac.uk/pdbsum/3omd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3omd ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3omd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3omd OCA], [https://pdbe.org/3omd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3omd RCSB], [https://www.ebi.ac.uk/pdbsum/3omd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3omd ProSAT]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/om/3omd_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/om/3omd_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Leptospirillum rubarum aliaga goltsman et al. 2009]]
[[Category: Large Structures]]
[[Category: Chang, C]]
[[Category: Leptospirillum rubarum]]
[[Category: Chen, Z]]
[[Category: Chang C]]
[[Category: Cui, H]]
[[Category: Chen Z]]
[[Category: Edwards, A]]
[[Category: Cui H]]
[[Category: Joachimiak, A]]
[[Category: Edwards A]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Savchenko, A]]
[[Category: Savchenko A]]
[[Category: Xu, X]]
[[Category: Xu X]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]

Latest revision as of 22:43, 26 March 2025

Crystal structure of unknown function protein from Leptospirillum rubarum

3omd, resolution 1.50Å

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