4por: Difference between revisions

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==Structure of Human Polyomavirus 9 VP1 pentamer in complex with 3'-sialyllactose==
==Structure of Human Polyomavirus 9 VP1 pentamer in complex with 3'-sialyllactose==
<StructureSection load='4por' size='340' side='right' caption='[[4por]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
<StructureSection load='4por' size='340' side='right'caption='[[4por]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4por]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_polyomavirus_9 Human polyomavirus 9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4POR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4POR FirstGlance]. <br>
<table><tr><td colspan='2'>[[4por]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_polyomavirus_9 Human polyomavirus 9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4POR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4POR FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4por FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4por OCA], [https://pdbe.org/4por PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4por RCSB], [https://www.ebi.ac.uk/pdbsum/4por PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4por ProSAT]</span></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4mby|4mby]], [[4fmi|4fmi]], [[4poq|4poq]], [[4pos|4pos]], [[4pot|4pot]]</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">gp3, vp1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=943908 Human polyomavirus 9])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4por FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4por OCA], [http://pdbe.org/4por PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4por RCSB], [http://www.ebi.ac.uk/pdbsum/4por PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4por ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/E9NQ90_9POLY E9NQ90_9POLY]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 4por" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4por" style="background-color:#fffaf0;"></div>
==See Also==
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Human polyomavirus 9]]
[[Category: Human polyomavirus 9]]
[[Category: Khan, Z M]]
[[Category: Large Structures]]
[[Category: Stehle, T]]
[[Category: Khan ZM]]
[[Category: Capsid formation]]
[[Category: Stehle T]]
[[Category: Carbohydrate]]
[[Category: Jelly roll fold]]
[[Category: Receptor interaction]]
[[Category: Sialyloligosaccharide]]
[[Category: Viral coat protein]]
[[Category: Viral protein]]