4f78: Difference between revisions

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==Crystal Structure of Vancomycin Resistance D,D-dipeptidase VanXYg==
==Crystal Structure of Vancomycin Resistance D,D-dipeptidase VanXYg==
<StructureSection load='4f78' size='340' side='right' caption='[[4f78]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
<StructureSection load='4f78' size='340' side='right'caption='[[4f78]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4f78]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"enterococcus_proteiformis"_thiercelin_and_jouhaud_1903 "enterococcus proteiformis" thiercelin and jouhaud 1903]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4F78 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4F78 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4f78]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4F78 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4F78 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4f78 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4f78 OCA], [https://pdbe.org/4f78 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4f78 RCSB], [https://www.ebi.ac.uk/pdbsum/4f78 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4f78 ProSAT]</span></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4muq|4muq]], [[4mur|4mur]], [[4mus|4mus]], [[4mut|4mut]], [[4oak|4oak]]</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">vanXYG, vanYG2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1351 "Enterococcus proteiformis" Thiercelin and Jouhaud 1903])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4f78 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4f78 OCA], [http://pdbe.org/4f78 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4f78 RCSB], [http://www.ebi.ac.uk/pdbsum/4f78 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4f78 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9KHL8_ENTFL Q9KHL8_ENTFL]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Enterococcus proteiformis thiercelin and jouhaud 1903]]
[[Category: Enterococcus faecalis]]
[[Category: Anderson, W F]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Anderson WF]]
[[Category: Courvalin, P]]
[[Category: Courvalin P]]
[[Category: Egorova, O]]
[[Category: Di Leo R]]
[[Category: Evdokimova, E]]
[[Category: Egorova O]]
[[Category: Kudritska, M]]
[[Category: Evdokimova E]]
[[Category: Leo, R Di]]
[[Category: Kudritska M]]
[[Category: Meziane-Cherif, D]]
[[Category: Meziane-Cherif D]]
[[Category: Minasov, G]]
[[Category: Minasov G]]
[[Category: Savchenko, A]]
[[Category: Savchenko A]]
[[Category: Stogios, P J]]
[[Category: Stogios PJ]]
[[Category: Wawrzak, Z]]
[[Category: Wawrzak Z]]
[[Category: Yim, V]]
[[Category: Yim V]]
[[Category: Alpha+beta protein]]
[[Category: Csgid]]
[[Category: D-alanine-d-alanine]]
[[Category: D-dipeptidase]]
[[Category: Hedgehog/dd-peptidase fold]]
[[Category: Hydrolase]]
[[Category: Merops m15b subfamily]]
[[Category: Metallopeptidase]]
[[Category: National institute of allergy and infectious disease]]
[[Category: Niaid]]
[[Category: Vancomycin resistance]]
[[Category: Zn2+-dependent d]]