5gnj: Difference between revisions

Line 1:

~~'''Unreleased structure'''~~

The ~~entry 5gnj~~ is ~~ON HOLD~~ ~~until Paper Publication~~

==Structure of a transcription factor and DNA complex==

~~Authors~~:

== Structural highlights ==

<table><tr><td colspan='2'>[[5gnj]] is a 16 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GNJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5GNJ FirstGlance]. <br>

~~Description~~:

</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5gnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gnj OCA], [http://pdbe.org/5gnj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5gnj RCSB], [http://www.ebi.ac.uk/pdbsum/5gnj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5gnj ProSAT]</span></td></tr>

[[Category: ~~Unreleased Structures~~]]

</table>

== Function ==

[[http://www.uniprot.org/uniprot/MYC2_ARATH MYC2_ARATH]] Transcriptional activator. Common transcription factor of light, abscisic acid (ABA), and jasmonic acid (JA) signaling pathways. With MYC3 and MYC4, controls additively subsets of JA-dependent responses. In cooperation with MYB2 is involved in the regulation of ABA-inducible genes under drought stress conditions. Can form complexes with all known glucosinolate-related MYBs to regulate glucosinolate biosynthesis. Binds to the MYC recognition site (5'-CACATG-3'), and to the G-box (5'-CACNTG-3') and Z-box (5'-ATACGTGT-3') of promoters. Binds directly to the promoters of the transcription factors PLETHORA1 (PLT1) and PLT2 and represses their expression. Negative regulator of blue light-mediated photomorphogenic growth and blue- and far-red-light regulated gene expression. Activates multiple TIFY/JAZ promoters. Positive regulator of lateral root formation. Regulates sesquiterpene biosynthesis. Subjected to proteasome-dependent proteolysis. The presence of the destruction element (DE) involved in turnover is required for the function to regulate gene transcription.<ref>PMID:12509522</ref> <ref>PMID:15208388</ref> <ref>PMID:15923349</ref> <ref>PMID:21321051</ref> <ref>PMID:21335373</ref> <ref>PMID:21954460</ref> <ref>PMID:22669881</ref> <ref>PMID:23142764</ref> <ref>PMID:23593022</ref> <ref>PMID:23943862</ref> <ref>PMID:9368419</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Lian, T]]

[[Category: Su, X]]

[[Category: Xu, Y]]

[[Category: Complex]]

[[Category: Dna]]

[[Category: Dna binding protein-dna complex]]

[[Category: Transcription factor]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 5gnj is ON HOLD  until Paper Publication
+==Structure of a transcription factor and DNA complex==
+<StructureSection load='5gnj' size='340' side='right' caption='[[5gnj]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-Authors:
+== Structural highlights ==
+<table><tr><td colspan='2'>[[5gnj]] is a 16 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GNJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5GNJ FirstGlance]. <br>
-Description:
+</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5gnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gnj OCA], [http://pdbe.org/5gnj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5gnj RCSB], [http://www.ebi.ac.uk/pdbsum/5gnj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5gnj ProSAT]</span></td></tr>
-[[Category: Unreleased Structures]]
+</table>
+== Function ==
+[[http://www.uniprot.org/uniprot/MYC2_ARATH MYC2_ARATH]] Transcriptional activator. Common transcription factor of light, abscisic acid (ABA), and jasmonic acid (JA) signaling pathways. With MYC3 and MYC4, controls additively subsets of JA-dependent responses. In cooperation with MYB2 is involved in the regulation of ABA-inducible genes under drought stress conditions. Can form complexes with all known glucosinolate-related MYBs to regulate glucosinolate biosynthesis. Binds to the MYC recognition site (5'-CACATG-3'), and to the G-box (5'-CACNTG-3') and Z-box (5'-ATACGTGT-3') of promoters. Binds directly to the promoters of the transcription factors PLETHORA1 (PLT1) and PLT2 and represses their expression. Negative regulator of blue light-mediated photomorphogenic growth and blue- and far-red-light regulated gene expression. Activates multiple TIFY/JAZ promoters. Positive regulator of lateral root formation. Regulates sesquiterpene biosynthesis. Subjected to proteasome-dependent proteolysis. The presence of the destruction element (DE) involved in turnover is required for the function to regulate gene transcription.<ref>PMID:12509522</ref> <ref>PMID:15208388</ref> <ref>PMID:15923349</ref> <ref>PMID:21321051</ref> <ref>PMID:21335373</ref> <ref>PMID:21954460</ref> <ref>PMID:22669881</ref> <ref>PMID:23142764</ref> <ref>PMID:23593022</ref> <ref>PMID:23943862</ref> <ref>PMID:9368419</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Lian, T]]
+[[Category: Su, X]]
+[[Category: Xu, Y]]
+[[Category: Complex]]
+[[Category: Dna]]
+[[Category: Dna binding protein-dna complex]]
+[[Category: Transcription factor]]