5m47: Difference between revisions

Line 1:

~~'''Unreleased structure'''~~

~~The entry~~ 5m47 is ~~ON HOLD~~

==Crystal strcuture of DapF from Corynebacterium glutamicum in complex with D,L-diaminopimelate==

~~Authors~~: ~~Sagong~~, H.-Y., ~~Kim~~, K.-J.

== Structural highlights ==

<table><tr><td colspan='2'>[[5m47]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M47 OCA]. For a guided tour on the structure components use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5M47 FirstGlance].

~~Description~~: ~~Crystal strcuture~~ of ~~DapF from Corynebacterium glutamicum in complex with D~~,L-diaminopimelate

</td></tr><tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat"><scene name='pdbligand=API:2,6-DIAMINOPIMELIC+ACID'>API</scene></td></tr>

[[Category: ~~Unreleased Structures~~]]

<tr id='activity'><td class="sblockLbl">Activity:</td><td class="sblockDat">[http://en.wikipedia.org/wiki/Diaminopimelate_epimerase Diaminopimelate epimerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.1.7 5.1.1.7] </td></tr>

[[Category: Kim, K.-J]]

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5m47 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m47 OCA], [http://pdbe.org/5m47 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m47 RCSB], [http://www.ebi.ac.uk/pdbsum/5m47 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m47 ProSAT]</td></tr>

[[Category: Sagong, H.-Y]]

</table>

== Function ==

[[http://www.uniprot.org/uniprot/DAPF_CORGL DAPF_CORGL]] Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan. Involved in the succinylase branch of the diaminopimelate biosynthesis.<ref>PMID:12948639</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Diaminopimelate epimerase]]

[[Category: Kim, K J]]

[[Category: Sagong, H Y]]

[[Category: Isomerase]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 5m47 is ON HOLD
+==Crystal strcuture of DapF from Corynebacterium glutamicum in complex with D,L-diaminopimelate==
+<StructureSection load='5m47' size='340' side='right' caption='[[5m47]], [[Resolution|resolution]] 2.59&Aring;' scene=''>
-Authors: Sagong, H.-Y., Kim, K.-J.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[5m47]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M47 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5M47 FirstGlance]. <br>
-Description: Crystal strcuture of DapF from Corynebacterium glutamicum in complex with D,L-diaminopimelate
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=API:2,6-DIAMINOPIMELIC+ACID'>API</scene></td></tr>
-[[Category: Unreleased Structures]]
+<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Diaminopimelate_epimerase Diaminopimelate epimerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.1.7 5.1.1.7] </span></td></tr>
-[[Category: Kim, K.-J]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5m47 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m47 OCA], [http://pdbe.org/5m47 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m47 RCSB], [http://www.ebi.ac.uk/pdbsum/5m47 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m47 ProSAT]</span></td></tr>
-[[Category: Sagong, H.-Y]]
+</table>
+== Function ==
+[[http://www.uniprot.org/uniprot/DAPF_CORGL DAPF_CORGL]] Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan. Involved in the succinylase branch of the diaminopimelate biosynthesis.<ref>PMID:12948639</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Diaminopimelate epimerase]]
+[[Category: Kim, K J]]
+[[Category: Sagong, H Y]]
+[[Category: Isomerase]]