5mdk: Difference between revisions
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==Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its as-isolated form (oxidized state - state 3)== | |||
<StructureSection load='5mdk' size='340' side='right' caption='[[5mdk]], [[Resolution|resolution]] 1.50Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[5mdk]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MDK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MDK FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=F4S:FE4-S3+CLUSTER'>F4S</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NFV:NI-FE+OXIDIZED+ACTIVE+CENTER'>NFV</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr> | |||
[[Category: | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydrogenase_(acceptor) Hydrogenase (acceptor)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.99.6 1.12.99.6] </span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mdk OCA], [http://pdbe.org/5mdk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mdk RCSB], [http://www.ebi.ac.uk/pdbsum/5mdk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mdk ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[[http://www.uniprot.org/uniprot/MBHL_CUPNH MBHL_CUPNH]] This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions. [[http://www.uniprot.org/uniprot/MBHS_CUPNH MBHS_CUPNH]] This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions. | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Kalms, J]] | |||
[[Category: Scheerer, P]] | [[Category: Scheerer, P]] | ||
[[Category: Schmidt, A]] | [[Category: Schmidt, A]] | ||
[[Category: Aerobic hydrogen bacteria]] | |||
[[Category: As-isolated state]] | |||
[[Category: Bimetallic]] | |||
[[Category: Dehydrogenase]] | |||
[[Category: Dihydrogen]] | |||
[[Category: Fe-s cluster]] | |||
[[Category: Gas transport]] | |||
[[Category: Hydrogen catalysis]] | |||
[[Category: Hydrophobic tunnel]] | |||
[[Category: Knallgasbacteria]] | |||
[[Category: Membrane]] | |||
[[Category: Membrane bound]] | |||
[[Category: Metalloenzyme]] | |||
[[Category: Metalloprotein catalytic center]] | |||
[[Category: Native]] | |||
[[Category: Ni-fe active site]] | |||
[[Category: Oxidized state]] | |||
[[Category: Oxidoreductase]] | |||
[[Category: Oxygen tolerant hydrogenase]] | |||
[[Category: Proteobacteria]] | |||
[[Category: T-cluster]] | |||
Revision as of 07:09, 22 February 2018
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its as-isolated form (oxidized state - state 3)
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Proteopedia Page Contributors and Editors (what is this?)
Categories:
- Kalms, J
- Scheerer, P
- Schmidt, A
- Aerobic hydrogen bacteria
- As-isolated state
- Bimetallic
- Dehydrogenase
- Dihydrogen
- Fe-s cluster
- Gas transport
- Hydrogen catalysis
- Hydrophobic tunnel
- Knallgasbacteria
- Membrane
- Membrane bound
- Metalloenzyme
- Metalloprotein catalytic center
- Native
- Ni-fe active site
- Oxidized state
- Oxidoreductase
- Oxygen tolerant hydrogenase
- Proteobacteria
- T-cluster
