Practical Guide to Homology Modeling: Difference between revisions

From Proteopedia
Jump to navigationJump to search
Eric Martz (talk | contribs)
Eric Martz (talk | contribs)
Line 37: Line 37:
** To explore one of these models, write down its 4-character [[PDB code]]. Then see [[#How To Explore 3D Models]] below.
** To explore one of these models, write down its 4-character [[PDB code]]. Then see [[#How To Explore 3D Models]] below.
*If there is no “PDB entry” column, then there are no sequence-identical empirical structures for your protein. Then try the Advanced search method below.
*If there is no “PDB entry” column, then there are no sequence-identical empirical structures for your protein. Then try the Advanced search method below.
*Some proteins have no Structure section (e.g. K4QDG1_SACBA). Then try the Advanced search method below.
*Some proteins have no Structure section (e.g. [http://www.uniprot.org/uniprot/K4QDG1 K4QDG1_SACBA]). Then try the Advanced search method below.


If empirical structures exist, see [[#How To Explore 3D Models]] below. If they are satisfactory, then you don't need a homology model.
If empirical structures exist, see [[#How To Explore 3D Models]] below. If they are satisfactory, then you don't need a homology model.