5awv: Difference between revisions
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==Crystal structure of glycopeptide hexose oxidase DBV29 complexed with teicoplanin== | ==Crystal structure of glycopeptide hexose oxidase DBV29 complexed with teicoplanin== | ||
<StructureSection load='5awv' size='340' side='right' caption='[[5awv]], [[Resolution|resolution]] 1.93Å' scene=''> | <StructureSection load='5awv' size='340' side='right'caption='[[5awv]], [[Resolution|resolution]] 1.93Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5awv]] is a 12 chain structure. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4k3t 4k3t] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2wdx 2wdx]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AWV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5AWV FirstGlance]. <br> | <table><tr><td colspan='2'>[[5awv]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_39727 Atcc 39727]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4k3t 4k3t] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2wdx 2wdx]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AWV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5AWV FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=N1L:2-AMINO-2-DEOXY-BETA-D-GLUCOPYRANURONIC+ACID'>N1L</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=T55:8-METHYLNONANOIC+ACID'>T55</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=N1L:2-AMINO-2-DEOXY-BETA-D-GLUCOPYRANURONIC+ACID'>N1L</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=T55:8-METHYLNONANOIC+ACID'>T55</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=3FG:(2S)-AMINO(3,5-DIHYDROXYPHENYL)ETHANOIC+ACID'>3FG</scene>, <scene name='pdbligand=3MY:3-CHLORO-D-TYROSINE'>3MY</scene>, <scene name='pdbligand=GHP:(2R)-AMINO(4-HYDROXYPHENYL)ETHANOIC+ACID'>GHP</scene>, <scene name='pdbligand=OMY:(BETAR)-3-CHLORO-BETA-HYDROXY-L-TYROSINE'>OMY</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=3FG:(2S)-AMINO(3,5-DIHYDROXYPHENYL)ETHANOIC+ACID'>3FG</scene>, <scene name='pdbligand=3MY:3-CHLORO-D-TYROSINE'>3MY</scene>, <scene name='pdbligand=GHP:(2R)-AMINO(4-HYDROXYPHENYL)ETHANOIC+ACID'>GHP</scene>, <scene name='pdbligand=OMY:(BETAR)-3-CHLORO-BETA-HYDROXY-L-TYROSINE'>OMY</scene></td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dbv29 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=93944 ATCC 39727])</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5awv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5awv OCA], [http://pdbe.org/5awv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5awv RCSB], [http://www.ebi.ac.uk/pdbsum/5awv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5awv ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5awv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5awv OCA], [http://pdbe.org/5awv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5awv RCSB], [http://www.ebi.ac.uk/pdbsum/5awv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5awv ProSAT]</span></td></tr> | ||
</table> | </table> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Atcc 39727]] | |||
[[Category: Large Structures]] | |||
[[Category: Li, T L]] | [[Category: Li, T L]] | ||
[[Category: Liu, Y C]] | [[Category: Liu, Y C]] | ||
[[Category: Oxidoreductase-antibiotic complex]] | [[Category: Oxidoreductase-antibiotic complex]] | ||
Revision as of 07:57, 3 July 2019
Crystal structure of glycopeptide hexose oxidase DBV29 complexed with teicoplanin
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