User:Wayne Decatur/Sequence analysis tools: Difference between revisions

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== Installable software for fine-tuning sequence alignments==
== Installable software for fine-tuning sequence alignments==
*[https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4756450/#CR3 SEQOTRON] - Mac Software for adjusting sequence alignments by hand. Unfortunately it discards the conservation data if it is there in input. Haven't found a way to put it back in the output other than use [http://www.bioinformatics.nl/ `cons` alignment consensus program and many others at EMBOSS explorer website]  
*[https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4756450/#CR3 SEQOTRON] - Mac Software for adjusting sequence alignments by hand. Unfortunately it discards the conservation data if it is there in input. Haven't found a way to put it back in the output other than use [http://www.bioinformatics.nl/ `cons` alignment consensus program and many others at EMBOSS explorer website]  
Windows equivalent is [http://www.mbio.ncsu.edu/BioEdit/page2.html here] but I have *NOT* tried it.
Windows equivalent is [http://www.mbio.ncsu.edu/BioEdit/page2.html here] but I have '''NOT''' tried it.


==My own sequence work-related code==
==My own sequence work-related code==