5wmb: Difference between revisions

Line 1:

~~'''Unreleased structure'''~~

~~The entry~~ 5wmb is ~~ON HOLD~~ ~~until Paper Publication~~

==Structure of the 10S (-)-cis-BP-dG modified Rev1 ternary complex (the BP residue is disordered)==

~~Authors~~:

== Structural highlights ==

<table><tr><td colspan='2'>[[5wmb]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WMB OCA]. For a guided tour on the structure components use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5WMB FirstGlance].

~~Description~~:

</td></tr><tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat"><scene name='pdbligand=DCP:2-DEOXYCYTIDINE-5-TRIPHOSPHATE'>DCP</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>

[[Category: ~~Unreleased Structures~~]]

<tr id='NonStdRes'><td class="sblockLbl">[[Non-Standard_Residue|NonStd Res:]]</td><td class="sblockDat"><scene name='pdbligand=DDG:2,3-DIDEOXY-GUANOSINE-5-MONOPHOSPHATE'>DDG</scene></td></tr>

<tr id='related'><td class="sblockLbl">[[Related_structure|Related:]]</td><td class="sblockDat">[[5wm1|5wm1]], [[5wm8|5wm8]]</td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5wmb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wmb OCA], [http://pdbe.org/5wmb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5wmb RCSB], [http://www.ebi.ac.uk/pdbsum/5wmb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5wmb ProSAT]</td></tr>

</table>

== Function ==

[[http://www.uniprot.org/uniprot/REV1_YEAST REV1_YEAST]] Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents. Involved in mitochondrial DNA mutagenesis.<ref>PMID:8751446</ref> <ref>PMID:11316789</ref> <ref>PMID:16452144</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Aggarwal, A K]]

[[Category: Geacintov, N E]]

[[Category: Kolbanovsky, A]]

[[Category: Landes, H]]

[[Category: Rechkoblit, O]]

[[Category: Dna binding protein]]

[[Category: Transferase-dna complex]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 5wmb is ON HOLD  until Paper Publication
+==Structure of the 10S (-)-cis-BP-dG modified Rev1 ternary complex (the BP residue is disordered)==
+<StructureSection load='5wmb' size='340' side='right' caption='[[5wmb]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-Authors:
+== Structural highlights ==
+<table><tr><td colspan='2'>[[5wmb]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WMB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5WMB FirstGlance]. <br>
-Description:
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DCP:2-DEOXYCYTIDINE-5-TRIPHOSPHATE'>DCP</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-[[Category: Unreleased Structures]]
+<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=DDG:2,3-DIDEOXY-GUANOSINE-5-MONOPHOSPHATE'>DDG</scene></td></tr>
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5wm1|5wm1]], [[5wm8|5wm8]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5wmb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wmb OCA], [http://pdbe.org/5wmb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5wmb RCSB], [http://www.ebi.ac.uk/pdbsum/5wmb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5wmb ProSAT]</span></td></tr>
+</table>
+== Function ==
+[[http://www.uniprot.org/uniprot/REV1_YEAST REV1_YEAST]] Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents. Involved in mitochondrial DNA mutagenesis.<ref>PMID:8751446</ref> <ref>PMID:11316789</ref> <ref>PMID:16452144</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Aggarwal, A K]]
+[[Category: Geacintov, N E]]
+[[Category: Kolbanovsky, A]]
+[[Category: Landes, H]]
+[[Category: Rechkoblit, O]]
+[[Category: Dna binding protein]]
+[[Category: Transferase-dna complex]]