5lly: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
Line 1: Line 1:


==Photosensory Module of Bacteriophytochrome linked Diguanylyl Cyclase from Idiomarina species A28L==
==Photosensory Module of Bacteriophytochrome linked Diguanylyl Cyclase from Idiomarina species A28L==
<StructureSection load='5lly' size='340' side='right' caption='[[5lly]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='5lly' size='340' side='right'caption='[[5lly]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5lly]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Idiomarina_sp._a28l Idiomarina sp. a28l]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LLY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5LLY FirstGlance]. <br>
<table><tr><td colspan='2'>[[5lly]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Idiomarina_sp._A28L Idiomarina sp. A28L]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LLY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LLY FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LBV:3-[2-[(Z)-[3-(2-CARBOXYETHYL)-5-[(Z)-(4-ETHENYL-3-METHYL-5-OXIDANYLIDENE-PYRROL-2-YLIDENE)METHYL]-4-METHYL-PYRROL-1-IUM-2-YLIDENE]METHYL]-5-[(Z)-[(3E)-3-ETHYLIDENE-4-METHYL-5-OXIDANYLIDENE-PYRROLIDIN-2-YLIDENE]METHYL]-4-METHYL-1H-PYRROL-3-YL]PROPANOIC+ACID'>LBV</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">A28LD_0430 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1036674 Idiomarina sp. A28L])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LBV:3-[2-[(Z)-[3-(2-CARBOXYETHYL)-5-[(Z)-(4-ETHENYL-3-METHYL-5-OXIDANYLIDENE-PYRROL-2-YLIDENE)METHYL]-4-METHYL-PYRROL-1-IUM-2-YLIDENE]METHYL]-5-[(Z)-[(3E)-3-ETHYLIDENE-4-METHYL-5-OXIDANYLIDENE-PYRROLIDIN-2-YLIDENE]METHYL]-4-METHYL-1H-PYRROL-3-YL]PROPANOIC+ACID'>LBV</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5lly FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lly OCA], [http://pdbe.org/5lly PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lly RCSB], [http://www.ebi.ac.uk/pdbsum/5lly PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lly ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lly FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lly OCA], [https://pdbe.org/5lly PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lly RCSB], [https://www.ebi.ac.uk/pdbsum/5lly PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lly ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/F7RW09_9GAMM F7RW09_9GAMM]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 19:
</div>
</div>
<div class="pdbe-citations 5lly" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5lly" style="background-color:#fffaf0;"></div>
==See Also==
*[[Diguanylate cyclase|Diguanylate cyclase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Idiomarina sp. a28l]]
[[Category: Idiomarina sp. A28L]]
[[Category: Gourinchas, G]]
[[Category: Large Structures]]
[[Category: Winkler, A]]
[[Category: Gourinchas G]]
[[Category: Bacteriophytochrome]]
[[Category: Winkler A]]
[[Category: C-di-gmp]]
[[Category: Diguanylate cyclase]]
[[Category: Hydrolase]]
[[Category: Light-regulation]]
[[Category: Signaling protein]]