2bee: Difference between revisions

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[[Image:2bee.gif|left|200px]]
[[Image:2bee.gif|left|200px]]


{{Structure
<!--
|PDB= 2bee |SIZE=350|CAPTION= <scene name='initialview01'>2bee</scene>, resolution 2.6&Aring;
The line below this paragraph, containing "STRUCTURE_2bee", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=A:ADENOSINE-5&#39;-MONOPHOSPHATE'>A</scene>, <scene name='pdbligand=C:CYTIDINE-5&#39;-MONOPHOSPHATE'>C</scene>, <scene name='pdbligand=G:GUANOSINE-5&#39;-MONOPHOSPHATE'>G</scene>, <scene name='pdbligand=JS4:(2S,3S,4R,5R,6R)-5-AMINO-2-(AMINOMETHYL)-6-((2R,3R,4R,5S)-4-(2-(3-AMINOPROPYLAMINO)ETHOXY)-5-((1R,2R,3S,5R,6S)-3,5-DIAMINO-2-((2S,3R,4R,5S,6R)-3-AMINO-4,5-DIHYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-6-HYDROXYCYCLOHEXYLOXY)-2-(HYDROXYMETHYL)-TETRAHYDROFURAN-3-YLOXY)-TETRAHYDRO-2H-PYRAN-3,4-DIOL'>JS4</scene>, <scene name='pdbligand=U:URIDINE-5&#39;-MONOPHOSPHATE'>U</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=  
or leave the SCENE parameter empty for the default display.
|GENE=  
-->
|DOMAIN=
{{STRUCTURE_2bee| PDB=2bee  | SCENE= }}  
|RELATEDENTRY=[[1j7t|1J7T]], [[2esi|2ESI]], [[2be0|2BE0]], [[2esj|2ESJ]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bee FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bee OCA], [http://www.ebi.ac.uk/pdbsum/2bee PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2bee RCSB]</span>
}}


'''Complex Between Paromomycin derivative JS4 and the 16S-Rrna A Site'''
'''Complex Between Paromomycin derivative JS4 and the 16S-Rrna A Site'''
Line 16: Line 13:


==About this Structure==
==About this Structure==
2BEE is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEE OCA].  
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEE OCA].  


==Reference==
==Reference==
Antibacterial aminoglycosides with a modified mode of binding to the ribosomal-RNA decoding site., Francois B, Szychowski J, Adhikari SS, Pachamuthu K, Swayze EE, Griffey RH, Migawa MT, Westhof E, Hanessian S, Angew Chem Int Ed Engl. 2004 Dec 10;43(48):6735-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15593140 15593140]
Antibacterial aminoglycosides with a modified mode of binding to the ribosomal-RNA decoding site., Francois B, Szychowski J, Adhikari SS, Pachamuthu K, Swayze EE, Griffey RH, Migawa MT, Westhof E, Hanessian S, Angew Chem Int Ed Engl. 2004 Dec 10;43(48):6735-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15593140 15593140]
[[Category: Protein complex]]
[[Category: Francois, B.]]
[[Category: Francois, B.]]
[[Category: Westhof, E.]]
[[Category: Westhof, E.]]
[[Category: a site]]
[[Category: A site]]
[[Category: aa bulge]]
[[Category: Aa bulge]]
[[Category: rna-aminoglycoside interaction]]
[[Category: Rna-aminoglycoside interaction]]
[[Category: uou pair]]
[[Category: Uou pair]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 20:10:48 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:05:09 2008''

Revision as of 17:10, 3 May 2008

File:2bee.gif

Template:STRUCTURE 2bee

Complex Between Paromomycin derivative JS4 and the 16S-Rrna A Site


About this Structure

Full crystallographic information is available from OCA.

Reference

Antibacterial aminoglycosides with a modified mode of binding to the ribosomal-RNA decoding site., Francois B, Szychowski J, Adhikari SS, Pachamuthu K, Swayze EE, Griffey RH, Migawa MT, Westhof E, Hanessian S, Angew Chem Int Ed Engl. 2004 Dec 10;43(48):6735-8. PMID:15593140 Page seeded by OCA on Sat May 3 20:10:48 2008

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