4tlh: Difference between revisions
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==Monoclinic Crystal Structure of EutL from Clostridium Perfringens== | ==Monoclinic Crystal Structure of EutL from Clostridium Perfringens== | ||
<StructureSection load='4tlh' size='340' side='right' caption='[[4tlh]], [[Resolution|resolution]] 1.70Å' scene=''> | <StructureSection load='4tlh' size='340' side='right'caption='[[4tlh]], [[Resolution|resolution]] 1.70Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4tlh]] is a 3 chain structure with sequence from [ | <table><tr><td colspan='2'>[[4tlh]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_perfringens_E_str._JGS1987 Clostridium perfringens E str. JGS1987]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TLH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4TLH FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4tlh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tlh OCA], [https://pdbe.org/4tlh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4tlh RCSB], [https://www.ebi.ac.uk/pdbsum/4tlh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4tlh ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/EUTL_CLOPE EUTL_CLOPE] A component of the bacterial microcompartment (BMC) shell dedicated to ethanolamine degradation. May be involved in cofactor diffusion across the BMC (Probable). Cobalamin is covalently bound to 1 subunit of the trimer on the concave (lumenal) face in a closed pore conformation; whether this is physiologically relevant is unclear (PubMed:25484204). The closed form has 3 very narrow channels (1.3 Angstrom at their narrowest) per trimer lined by acidic and aromatic residues; 2 ethanolamine molecules can bind in each channel, on either side of the constriction. Does not bind acetate, ethanol or acetyl phosphate, all of which are small molecules involved in ethanolamine metabolism (PubMed:25752492). Ethanolamine-binding has been hypothesized to stabilize the EutL central pore in a closed (non-transporting) state. An open pore is thought to be large enough to transport ATP and/or cobalamin (Probable).<ref>PMID:25484204</ref> <ref>PMID:25752492</ref> <ref>PMID:25484204</ref> <ref>PMID:25752492</ref> <ref>PMID:29717712</ref> | |||
== References == | |||
<references/> | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Clostridium perfringens | [[Category: Clostridium perfringens E str. JGS1987]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Thompson MC]] | ||
[[Category: | [[Category: Yeates TO]] | ||
