5o96: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
Line 1: Line 1:


==Structure of the putative methyltransferase Lpg2936 from Legionella pneumophila in complex with the bound cofactor SAM==
==Structure of the putative methyltransferase Lpg2936 from Legionella pneumophila in complex with the bound cofactor SAM==
<StructureSection load='5o96' size='340' side='right' caption='[[5o96]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='5o96' size='340' side='right'caption='[[5o96]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5o96]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33152 Atcc 33152]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O96 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5O96 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5o96]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Legionella_pneumophila Legionella pneumophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O96 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5O96 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lpg2936 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=446 ATCC 33152])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/16S_rRNA_(uracil(1498)-N(3))-methyltransferase 16S rRNA (uracil(1498)-N(3))-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.193 2.1.1.193] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5o96 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o96 OCA], [https://pdbe.org/5o96 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5o96 RCSB], [https://www.ebi.ac.uk/pdbsum/5o96 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5o96 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5o96 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o96 OCA], [http://pdbe.org/5o96 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5o96 RCSB], [http://www.ebi.ac.uk/pdbsum/5o96 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5o96 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/Q5ZRE6_LEGPH Q5ZRE6_LEGPH]] Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.[PIRNR:PIRNR015601]  
[https://www.uniprot.org/uniprot/Q5ZRE6_LEGPH Q5ZRE6_LEGPH] Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.[PIRNR:PIRNR015601]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 33152]]
[[Category: Large Structures]]
[[Category: Pinotsis, N]]
[[Category: Legionella pneumophila]]
[[Category: Waksman, G]]
[[Category: Pinotsis N]]
[[Category: Rna methyltransferase]]
[[Category: Waksman G]]
[[Category: Rsme-like]]
[[Category: S-adenosylmethionine]]
[[Category: Sam]]
[[Category: Transferase]]