6exf: Difference between revisions

Line 1:

~~'''Unreleased structure'''~~

~~The entry~~ 6exf ~~is ON HOLD until Paper Publication~~

==Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Fe(II)/Lysine==

~~Authors~~: ~~Isabet, T~~., ~~Stura~~, E., ~~Legrand~~, P., ~~Zaparucha~~, A., ~~Bastard, K~~.

== Structural highlights ==

<table><tr><td colspan='2'>[[6exf]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EXF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EXF FirstGlance]. <br>

~~Description~~: ~~Crystal structure of the complex Fe(II)~~/~~alpha~~-ketoglutarate dependent dioxygenase ~~KDO5 with Fe~~(II)/~~Lysine~~

</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LYS:LYSINE'>LYS</scene></td></tr>

[[Category: ~~Unreleased Structures~~]]

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6exf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6exf OCA], [http://pdbe.org/6exf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6exf RCSB], [http://www.ebi.ac.uk/pdbsum/6exf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6exf ProSAT]</span></td></tr>

</table>

== Function ==

[[http://www.uniprot.org/uniprot/LYS4O_FLASC LYS4O_FLASC]] Alpha-ketoglutarate-dependent dioxygenase that in vitro catalyzes the regio- and stereoselective hydroxylation of L-lysine, leading to (4R)-4-hydroxy-L-lysine.[REFERENCE:2]

__TOC__

</StructureSection>

[[Category: Bastard, K]]

[[Category: Isabet, T]]

[[Category: Legrand, P]]

[[Category: Stura, E]]

~~[[Category: Isabet, T]]~~

~~[[Category: Bastard, K]]~~

[[Category: Zaparucha, A]]

[[Category: Dioxygenase]]

[[Category: Enzyme]]

[[Category: Feii lysine form]]

[[Category: Oxidoreductase]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 6exf is ON HOLD  until Paper Publication
+==Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Fe(II)/Lysine==
+<StructureSection load='6exf' size='340' side='right' caption='[[6exf]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-Authors: Isabet, T., Stura, E., Legrand, P., Zaparucha, A., Bastard, K.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[6exf]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EXF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EXF FirstGlance]. <br>
-Description: Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Fe(II)/Lysine
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LYS:LYSINE'>LYS</scene></td></tr>
-[[Category: Unreleased Structures]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6exf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6exf OCA], [http://pdbe.org/6exf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6exf RCSB], [http://www.ebi.ac.uk/pdbsum/6exf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6exf ProSAT]</span></td></tr>
+</table>
+== Function ==
+[[http://www.uniprot.org/uniprot/LYS4O_FLASC LYS4O_FLASC]] Alpha-ketoglutarate-dependent dioxygenase that in vitro catalyzes the regio- and stereoselective hydroxylation of L-lysine, leading to (4R)-4-hydroxy-L-lysine.[REFERENCE:2]
+__TOC__
+</StructureSection>
+[[Category: Bastard, K]]
+[[Category: Isabet, T]]
 [[Category: Legrand, P]]
 [[Category: Stura, E]]
-[[Category: Isabet, T]]
-[[Category: Bastard, K]]
 [[Category: Zaparucha, A]]
+[[Category: Dioxygenase]]
+[[Category: Enzyme]]
+[[Category: Feii lysine form]]
+[[Category: Oxidoreductase]]