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==Crystal structure of the complex of the kappa-carrageenase from Pseudoalteromonas carrageenovora with an oligotetrasaccharide of kappa-carrageenan==
==Crystal structure of the complex of the kappa-carrageenase from Pseudoalteromonas carrageenovora with an oligotetrasaccharide of kappa-carrageenan==
<StructureSection load='5ocq' size='340' side='right' caption='[[5ocq]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='5ocq' size='340' side='right'caption='[[5ocq]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5ocq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43555 Atcc 43555]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OCQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5OCQ FirstGlance]. <br>
<table><tr><td colspan='2'>[[5ocq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudoalteromonas_carrageenovora Pseudoalteromonas carrageenovora]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OCQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5OCQ FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=9RN:3,6-anhydro-D-galactose'>9RN</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=G4S:4-O-SULFO-BETA-D-GALACTOPYRANOSE'>G4S</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cgkA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=227 ATCC 43555])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=9RN:3,6-anhydro-D-galactose'>9RN</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=G4S:4-O-SULFO-BETA-D-GALACTOPYRANOSE'>G4S</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Kappa-carrageenase Kappa-carrageenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.83 3.2.1.83] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ocq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ocq OCA], [https://pdbe.org/5ocq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ocq RCSB], [https://www.ebi.ac.uk/pdbsum/5ocq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ocq ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ocq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ocq OCA], [http://pdbe.org/5ocq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ocq RCSB], [http://www.ebi.ac.uk/pdbsum/5ocq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ocq ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CGKA_PSEVC CGKA_PSEVC]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 43555]]
[[Category: Large Structures]]
[[Category: Kappa-carrageenase]]
[[Category: Pseudoalteromonas carrageenovora]]
[[Category: Bernard, T]]
[[Category: Bernard T]]
[[Category: Czjzek, M]]
[[Category: Czjzek M]]
[[Category: Jeudy, A]]
[[Category: Jeudy A]]
[[Category: Leroux, C]]
[[Category: Leroux C]]
[[Category: Matard-Mann, M]]
[[Category: Matard-Mann M]]
[[Category: Michel, G]]
[[Category: Michel G]]
[[Category: Beta jellyroll]]
[[Category: Glycoside hydrolase]]
[[Category: Hydrolase]]
[[Category: Marine carbohydrase]]