6bk1: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
Line 1: Line 1:


==Crystal structure of Os79 T291V from O. sativa in complex with UDP.==
==Crystal structure of Os79 T291V from O. sativa in complex with UDP.==
<StructureSection load='6bk1' size='340' side='right' caption='[[6bk1]], [[Resolution|resolution]] 1.58&Aring;' scene=''>
<StructureSection load='6bk1' size='340' side='right'caption='[[6bk1]], [[Resolution|resolution]] 1.58&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6bk1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Japanese_rice Japanese rice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BK1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BK1 FirstGlance]. <br>
<table><tr><td colspan='2'>[[6bk1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryza_sativa_Japonica_Group Oryza sativa Japonica Group]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BK1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6BK1 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.58&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">UGT79, OS79, Os04g0206600, LOC_Os04g12970, OsJ_13826, OSJNBa0052O21.15 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=39947 Japanese rice])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6bk1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bk1 OCA], [http://pdbe.org/6bk1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6bk1 RCSB], [http://www.ebi.ac.uk/pdbsum/6bk1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6bk1 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6bk1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bk1 OCA], [https://pdbe.org/6bk1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6bk1 RCSB], [https://www.ebi.ac.uk/pdbsum/6bk1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6bk1 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/UGT79_ORYSJ UGT79_ORYSJ]] Involved in the detoxification of the Fusarium mycotoxin deoxynivalenol by the transfer of glucose from UDP-D-glucose to the hydroxyl group at C-3, forming deoxynivalenol-3-O-beta-D-glucoside.<ref>PMID:26197338</ref> <ref>PMID:27715009</ref>
[https://www.uniprot.org/uniprot/UGT79_ORYSJ UGT79_ORYSJ] Involved in the detoxification of the Fusarium mycotoxin deoxynivalenol by the transfer of glucose from UDP-D-glucose to the hydroxyl group at C-3, forming deoxynivalenol-3-O-beta-D-glucoside.<ref>PMID:26197338</ref> <ref>PMID:27715009</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 6bk1" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6bk1" style="background-color:#fffaf0;"></div>
==See Also==
*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Japanese rice]]
[[Category: Large Structures]]
[[Category: Gabardi, K]]
[[Category: Oryza sativa Japonica Group]]
[[Category: Rayment, I]]
[[Category: Gabardi K]]
[[Category: Wetterhorn, K]]
[[Category: Rayment I]]
[[Category: Transferase]]
[[Category: Wetterhorn K]]
[[Category: Trichothecene]]
[[Category: Udp-glucosyltransferase]]

Latest revision as of 14:43, 4 October 2023

Crystal structure of Os79 T291V from O. sativa in complex with UDP.

6bk1, resolution 1.58Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA