2d2k: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
Line 1: Line 1:
[[Image:2d2k.gif|left|200px]]
[[Image:2d2k.gif|left|200px]]


{{Structure
<!--
|PDB= 2d2k |SIZE=350|CAPTION= <scene name='initialview01'>2d2k</scene>, resolution 2.65&Aring;
The line below this paragraph, containing "STRUCTURE_2d2k", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=A:ADENOSINE-5&#39;-MONOPHOSPHATE'>A</scene>, <scene name='pdbligand=A2M:2&#39;-O-METHYL-ADENOSINE-5&#39;-MONOPHOSPHATE'>A2M</scene>, <scene name='pdbligand=C:CYTIDINE-5&#39;-MONOPHOSPHATE'>C</scene>, <scene name='pdbligand=G:GUANOSINE-5&#39;-MONOPHOSPHATE'>G</scene>, <scene name='pdbligand=NCO:COBALT+HEXAMMINE+ION'>NCO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=U:URIDINE-5&#39;-MONOPHOSPHATE'>U</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=  
or leave the SCENE parameter empty for the default display.
|GENE=  
-->
|DOMAIN=
{{STRUCTURE_2d2k| PDB=2d2k  | SCENE= }}  
|RELATEDENTRY=[[1x9c|1X9C]], [[1x9k|1X9K]], [[2d2l|2D2L]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d2k OCA], [http://www.ebi.ac.uk/pdbsum/2d2k PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2d2k RCSB]</span>
}}


'''Crystal Structure of a minimal, native (U39) all-RNA hairpin ribozyme'''
'''Crystal Structure of a minimal, native (U39) all-RNA hairpin ribozyme'''
Line 19: Line 16:


==About this Structure==
==About this Structure==
2D2K is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D2K OCA].  
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D2K OCA].  


==Reference==
==Reference==
Conformational heterogeneity at position U37 of an all-RNA hairpin ribozyme with implications for metal binding and the catalytic structure of the S-turn., Alam S, Grum-Tokars V, Krucinska J, Kundracik ML, Wedekind JE, Biochemistry. 2005 Nov 8;44(44):14396-408. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16262240 16262240]
Conformational heterogeneity at position U37 of an all-RNA hairpin ribozyme with implications for metal binding and the catalytic structure of the S-turn., Alam S, Grum-Tokars V, Krucinska J, Kundracik ML, Wedekind JE, Biochemistry. 2005 Nov 8;44(44):14396-408. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16262240 16262240]
[[Category: Protein complex]]
[[Category: Alam, S.]]
[[Category: Alam, S.]]
[[Category: Grum-Tokars, V.]]
[[Category: Grum-Tokars, V.]]
Line 29: Line 25:
[[Category: Kundracik, M L.]]
[[Category: Kundracik, M L.]]
[[Category: Wedekind, J E.]]
[[Category: Wedekind, J E.]]
[[Category: dual conformation]]
[[Category: Dual conformation]]
[[Category: ribozyme]]
[[Category: Ribozyme]]
[[Category: s-turn]]
[[Category: S-turn]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 23:35:02 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:29:26 2008''