Sandbox Reserved 1440: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| Line 20: | Line 20: | ||
<b>Sidechain outliers</b> - Measures protein sidechain outliers and deviations from expected backbone angles. | <b>Sidechain outliers</b> - Measures protein sidechain outliers and deviations from expected backbone angles. | ||
== JMol Images == | |||
This page will allow the user to view Jmol renderings of each protein along with the ligand in the binding pocket. The validation report will also identify the clashes in the model, which will be indicated as follows: | |||
<p style="color:#FF0000";>Red atoms</p> indicate that there are significant clashes in the area of the displayed atom | |||
<p style="color:#3333FF";>Blue atoms</p> indicate that there are less significant but still present clashes in the area of the displayed atom. | |||
Overall <p style="color:#3333FF";>Blue</p> indicates a minor issue, while <p style="color:#FF0000";>Red </p> indicates a major discrepancy between the measured electron density and the location in the model. | |||
