Sandbox Reserved 1440: Difference between revisions

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== 4N8D ==
== 4N8D ==


4N8D with resolution 1.65 Å: an overview of the binding site, missing densities, and clashes. Overall, the missing density sizes are not significant, which gives this crystal a valid structure. And the clashscore is not high, which means it’s not conflicting with the binding site. This crystal seems to be less valid than 6B1E in terms of the RSRZ score, but not enough to be claimed an invalid structure.
4N8D with resolution 1.65 Å: an overview of the binding site and missing densities. Overall, the missing density sizes are not significant, which gives this crystal a valid structure.


<jmol><jmollink><text>View Figure 1g: 4N8D overview</text><script>exit;figure=1;SCRIPT "http://proteopedia.org/wiki/images/0/00/4n8d_D.png";spin on</script></jmollink></jmol>
<jmol><jmollink><text>View Figure 1g: 4N8D overview</text><script>exit;figure=1;SCRIPT "http://proteopedia.org/wiki/images/0/00/4n8d_D.png";spin on</script></jmollink></jmol>


4N8D: the catalytic triads missing densities are shown. The densities of the amino acids are not significant enough to be viewed as an invalid structure, but does have more missing than the 6B1E crystal.
The catalytic triad's electron densities are shown. There isn’t enough density missing around the catalytic triad for the structure to be considered invalid.


<jmol><jmollink><text>View Figure 1h: 4N8D catalytic triad</text><script>exit;figure=1;SCRIPT "http://proteopedia.org/wiki/images/f/f4/4n8d_E.png";zoomto *4</script></jmollink></jmol>
<jmol><jmollink><text>View Figure 1h: 4N8D catalytic triad</text><script>exit;figure=1;SCRIPT "http://proteopedia.org/wiki/images/f/f4/4n8d_E.png";zoomto *4</script></jmollink></jmol>
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