Jmol/Visualizing membrane position: Difference between revisions
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Here are two ways of visualizing the position of a lipid bilayer membrane around the integral membrane portion of a trans-membrane protein. | Here are two ways of visualizing the position of a lipid bilayer membrane around the integral membrane portion of a trans-membrane protein. | ||
:1. <scene name='78/784276/Opm2/1'>Pseudoatoms</scene> represent the water-lipid boundaries. <font color='red'>Red</font> pseudoatoms represent the extracellular boundary, and <font color='blue'>blue</font> pseudoatoms represent the cytoplasmic boundary. | :1. <scene name='78/784276/Opm2/1'>Pseudoatoms</scene> represent the water-lipid boundaries. <font color='red'>Red</font> pseudoatoms represent the extracellular boundary, and <font color='blue'>blue</font> pseudoatoms represent the cytoplasmic boundary. | ||
<center><table><tr><td>[[Image:Opm_key.gif]]</td><td></tr></table> | <center><table><tr><td>[[Image:Opm_key.gif]]</td> | ||
<font color="red"><b>Outside</b></font> | |||
<td></tr></table></center> | |||
:2 | :2 | ||
