Jmol/Visualizing membrane position: Difference between revisions
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* [http://FirstGlance.Jmol.Org/fg.htm?mol=http%3A//proteopedia.org/wiki/images/d/da/5lil_opm2.pdb View 5lil_opm2.pdb in FirstGlance in Jmol] | * [http://FirstGlance.Jmol.Org/fg.htm?mol=http%3A//proteopedia.org/wiki/images/d/da/5lil_opm2.pdb View 5lil_opm2.pdb in FirstGlance in Jmol] | ||
The pseudoatoms have residue name DUM (for dummy atoms). This can be used in the SAT to select them. The red pseudoatoms are oxygens, and the blue pseudoatoms are nitrogens. Thus, coloring them by '' | The pseudoatoms have residue name DUM (for dummy atoms). This can be used in the SAT to select them. The red pseudoatoms are oxygens, and the blue pseudoatoms are nitrogens. Thus, coloring them by ''chemical element'' ([[CPK]]) will make them red and blue. | ||
==Methods: Translucent Cylinder== | ==Methods: Translucent Cylinder== | ||
