4pi9: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
Line 1: Line 1:


==Crystal structure of S. Aureus Autolysin E in complex with muropeptide NAM-L-ALA-D-iGLU==
==Crystal structure of S. Aureus Autolysin E in complex with muropeptide NAM-L-ALA-D-iGLU==
<StructureSection load='4pi9' size='340' side='right' caption='[[4pi9]], [[Resolution|resolution]] 1.48&Aring;' scene=''>
<StructureSection load='4pi9' size='340' side='right'caption='[[4pi9]], [[Resolution|resolution]] 1.48&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4pi9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staam Staam]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PI9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PI9 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4pi9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_Mu50 Staphylococcus aureus subsp. aureus Mu50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PI9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PI9 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3LT:(4R)-4-[[(2S)-2-[[(2R)-2-[(2R,3S,4R,5R,6R)-5-ACETAMIDO-2-(HYDROXYMETHYL)-3,6-BIS(OXIDANYL)OXAN-4-YL]OXYPROPANOYL]AMINO]PROPANOYL]AMINO]-5-AZANYL-5-OXIDANYLIDENE-PENTANOIC+ACID'>3LT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3LT:(4R)-4-[[(2S)-2-[[(2R)-2-[(2R,3S,4R,5R,6R)-5-ACETAMIDO-2-(HYDROXYMETHYL)-3,6-BIS(OXIDANYL)OXAN-4-YL]OXYPROPANOYL]AMINO]PROPANOYL]AMINO]-5-AZANYL-5-OXIDANYLIDENE-PENTANOIC+ACID'>3LT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SAV2307 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=158878 STAAM])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pi9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pi9 OCA], [https://pdbe.org/4pi9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pi9 RCSB], [https://www.ebi.ac.uk/pdbsum/4pi9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pi9 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pi9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pi9 OCA], [http://pdbe.org/4pi9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4pi9 RCSB], [http://www.ebi.ac.uk/pdbsum/4pi9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4pi9 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A0H3JT72_STAAM A0A0H3JT72_STAAM]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Staam]]
[[Category: Large Structures]]
[[Category: Mihelic, M]]
[[Category: Staphylococcus aureus subsp. aureus Mu50]]
[[Category: Renko, M]]
[[Category: Mihelic M]]
[[Category: Turk, D]]
[[Category: Renko M]]
[[Category: Autolysin]]
[[Category: Turk D]]
[[Category: Glycosidase]]
[[Category: Hydrolase]]
[[Category: Muropeptide]]
[[Category: Peptidoglycan]]