User:David Ryskamp/Sandbox1: Difference between revisions
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<table><tr><td colspan='2'> | <table><tr><td colspan='2'> | ||
<tr id='Nucleotide'><td class="sblockLbl"><b>Nucleotide</b></td><td class="sblockDat">PABP residue</td><td class="sblockDat">Atom on PABP residue</td><td class="sblockDat">Atom on RNA</td> | <tr id='Nucleotide'><td class="sblockLbl"><b>Nucleotide</b></td><td class="sblockDat">PABP residue</td><td class="sblockDat">Atom on PABP residue</td><td class="sblockDat">Atom on RNA</td> | ||
<tr id='A2'><td class="sblockLbl"><b>A2</b></td><td class="sblockDat"><scene name='78/782616/Asn105-a2_fd/3'>Asn105</scene></td><td class="sblockDat">amide oxygen</td><td class="sblockLbl">< | <tr id='A2'><td class="sblockLbl"><b>A2</b></td><td class="sblockDat"><scene name='78/782616/Asn105-a2_fd/3'>Asn105</scene></td><td class="sblockDat">amide oxygen</td><td class="sblockLbl"><b>N6<b></td> | ||
<tr id='A3'><td class="sblockLbl"><b>A3</b></td><td class="sblockDat"><scene name='78/782616/Lys174-a3_fd/2'>Lys174</scene></td><td class="sblockDat">main chain oxygen</td></tr> | <tr id='A3'><td class="sblockLbl"><b>A3</b></td><td class="sblockDat"><scene name='78/782616/Lys174-a3_fd/2'>Lys174</scene></td><td class="sblockDat">main chain oxygen</td></tr><td class="sblockLbl"><b>N3<b></td> | ||
<tr id='A4'><td class="sblockLbl"><b>A4</b></td><td class="sblockDat"><scene name='78/782616/Asn100-a4_fd/2'>Asn104</scene></td><td class="sblockDat">side chain amine</td></tr> | <tr id='A4'><td class="sblockLbl"><b>A4</b></td><td class="sblockDat"><scene name='78/782616/Asn100-a4_fd/2'>Asn104</scene></td><td class="sblockDat">side chain amine</td></tr><td class="sblockLbl"><b>N7<b></td> | ||
<tr id='A4'><td class="sblockLbl"><b>A4</b></td><td class="sblockDat"><scene name='78/782616/Ser127-a4_fd/2'>Ser127</scene></td><td class="sblockDat">main chain oxygen</td></tr> | <tr id='A4'><td class="sblockLbl"><b>A4</b></td><td class="sblockDat"><scene name='78/782616/Ser127-a4_fd/2'>Ser127</scene></td><td class="sblockDat">main chain oxygen</td></tr><td class="sblockLbl"><b>N1<b></td> | ||
<tr id='A5'><td class="sblockLbl"><b>A5</b></td><td class="sblockDat"><scene name='78/782616/His144-a5_fd/2'>His144</scene></td><td class="sblockDat">pyrimidine γ-amine </td></tr> | <tr id='A5'><td class="sblockLbl"><b>A5</b></td><td class="sblockDat"><scene name='78/782616/His144-a5_fd/2'>His144</scene></td><td class="sblockDat">pyrimidine γ-amine </td></tr><td class="sblockLbl"><b>N6<b></td> | ||
<tr id='A6'><td class="sblockLbl"><b>A6</b></td><td class="sblockDat"><scene name='78/782616/Gln88-a6_fd/2'>Gln88</scene></td><td class="sblockDat">main chain nitrogen</td></tr> | <tr id='A6'><td class="sblockLbl"><b>A6</b></td><td class="sblockDat"><scene name='78/782616/Gln88-a6_fd/2'>Gln88</scene></td><td class="sblockDat">main chain nitrogen</td></tr><td class="sblockLbl"><b>N1<b></td> | ||
<tr id='A6'><td class="sblockLbl"><b>A6</b></td><td class="sblockDat"><scene name='78/782616/Trp86-a6_fd/3'>Trp86</scene></td><td class="sblockDat">main chain nitrogen</td></tr> | <tr id='A6'><td class="sblockLbl"><b>A6</b></td><td class="sblockDat"><scene name='78/782616/Trp86-a6_fd/3'>Trp86</scene></td><td class="sblockDat">main chain nitrogen</td></tr><td class="sblockLbl"><b>N6<b></td> | ||
<tr id='A7'><td class="sblockLbl"><b>A7</b></td><td class="sblockDat"><scene name='78/782616/Tyr54-ribose_a7_fd/2'>Tyr54</scene></td><td class="sblockDat">side chain phenol</td></tr> | <tr id='A7'><td class="sblockLbl"><b>A7</b></td><td class="sblockDat"><scene name='78/782616/Tyr54-ribose_a7_fd/2'>Tyr54</scene></td><td class="sblockDat">side chain phenol</td></tr><td class="sblockLbl"><b>ribose 2OH<b></td> | ||
<tr id='A7'><td class="sblockLbl"><b>A7</b></td><td class="sblockDat"><scene name='78/782616/Asp45-a7_fd/2'>Asp45</scene></td><td class="sblockDat">side chain carbonyl</td></tr> | <tr id='A7'><td class="sblockLbl"><b>A7</b></td><td class="sblockDat"><scene name='78/782616/Asp45-a7_fd/2'>Asp45</scene></td><td class="sblockDat">side chain carbonyl</td></tr><td class="sblockLbl"><b>N6<b></td> | ||
<tr id='A7'><td class="sblockLbl"><b>A7</b></td><td class="sblockDat"><scene name='78/782616/Met46-a7_fd/2'>Met46</scene></td><td class="sblockDat">main chain nitrogen</td></tr> | <tr id='A7'><td class="sblockLbl"><b>A7</b></td><td class="sblockDat"><scene name='78/782616/Met46-a7_fd/2'>Met46</scene></td><td class="sblockDat">main chain nitrogen</td></tr><td class="sblockLbl"><b>N1<b></td> | ||
<tr id='A8'><td class="sblockLbl"><b>A8</b></td><td class="sblockDat"><scene name='78/782616/Tyr54-a8_fd/2'>Tyr54</scene></td><td class="sblockDat">side chain phenol</td></tr> | <tr id='A8'><td class="sblockLbl"><b>A8</b></td><td class="sblockDat"><scene name='78/782616/Tyr54-a8_fd/2'>Tyr54</scene></td><td class="sblockDat">side chain phenol</td></tr><td class="sblockLbl"><b>phosphate OH<b></td> | ||
<tr id='A8'><td class="sblockLbl"><b>A8</b></td><td class="sblockDat"><scene name='78/782616/Tyr56-a8_fd/2'>Tyr56</scene></td><td class="sblockDat">side chain phenol</td></tr> | <tr id='A8'><td class="sblockLbl"><b>A8</b></td><td class="sblockDat"><scene name='78/782616/Tyr56-a8_fd/2'>Tyr56</scene></td><td class="sblockDat">side chain phenol</td></tr><td class="sblockLbl"><b>phosphate OH<b></td> | ||
<tr id='A9'><td class="sblockLbl"><b>A9</b></td><td class="sblockDat"><scene name='78/782616/Arg44-a9_fd/2'>Arg44</scene></td><td class="sblockDat">side chain τ-amine</td></tr> | <tr id='A9'><td class="sblockLbl"><b>A9</b></td><td class="sblockDat"><scene name='78/782616/Arg44-a9_fd/2'>Arg44</scene></td><td class="sblockDat">side chain τ-amine</td></tr><td class="sblockLbl"><b>N1<b></td> | ||
</table> | </table> | ||
