6cxq: Difference between revisions

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'''Unreleased structure'''


The entry 6cxq is ON HOLD  until Paper Publication
==HRFLRH peptide NMR structure in the presence of CO2==
<StructureSection load='6cxq' size='340' side='right' caption='[[6cxq]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[6cxq]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CXQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6CXQ FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6cxq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6cxq OCA], [http://pdbe.org/6cxq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6cxq RCSB], [http://www.ebi.ac.uk/pdbsum/6cxq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6cxq ProSAT]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
A previously undescribed six residues long peptide His-Arg-Phe-Leu-Arg-His was identified and purified from the skin secretion of the amphibian Phyllomedusa centralis. A synthetic analogue carboxyamidated HRFLRH-NH2 showed structural changes induced by CO2 and metal ions in aqueous solution when analyzed by NMR. The present work reports NMR structures for the carboxyamidated hexapeptide in the presence CO2, Zn(2+) and Cd(2+), suggesting possible affinity regions on the polypeptide chain for each ligand. The NMR structures were optimized by DFT to identify probable biding sites of these species in the polypeptide structure. To our best knowledge, this is the first time that a putative CO2 binding site is described on a peptide structure obtained in aqueous conditions, at room temperature.


Authors: Pires, D.A.T., Arake, L.M.R., Silva, L.P., Lopez-Castillo, A., Prates, M.V., Nascimento, C.J., Bloch Jr, C.
A previously undescribed hexapeptide His-Arg-Phe-Leu-Arg-His-NH2 from amphibian skin secretion shows CO2 and metal biding affinities.,Pires DAT, Arake LMR, Silva LP, Lopez-Castillo A, Prates MV, Nascimento CJ, Bloch C Jr Peptides. 2018 Jun 19;106:37-44. doi: 10.1016/j.peptides.2018.06.003. PMID:29933027<ref>PMID:29933027</ref>


Description: HRFLRH peptide NMR structure in the presence of CO2
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
<div class="pdbe-citations 6cxq" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Arake, L M.R]]
[[Category: Jr, C Bloch]]
[[Category: Lopez-Castillo, A]]
[[Category: Lopez-Castillo, A]]
[[Category: Pires, D.A.T]]
[[Category: Nascimento, C J]]
[[Category: Bloch Jr, C]]
[[Category: Pires, D A.T]]
[[Category: Silva, L.P]]
[[Category: Prates, M V]]
[[Category: Arake, L.M.R]]
[[Category: Silva, L P]]
[[Category: Nascimento, C.J]]
[[Category: Amphibian skin secretion]]
[[Category: Prates, M.V]]
[[Category: Co2 affinity]]
[[Category: Metal affinity]]
[[Category: Metal binding protein]]
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