2kbd: Difference between revisions

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[[Image:2kbd.gif|left|200px]]
[[Image:2kbd.gif|left|200px]]


{{Structure
<!--
|PDB= 2kbd |SIZE=350|CAPTION= <scene name='initialview01'>2kbd</scene>
The line below this paragraph, containing "STRUCTURE_2kbd", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=DA:2&#39;-DEOXYADENOSINE-5&#39;-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2&#39;-DEOXYCYTIDINE-5&#39;-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=  
or leave the SCENE parameter empty for the default display.
|GENE=  
-->
|DOMAIN=
{{STRUCTURE_2kbd| PDB=2kbd  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kbd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kbd OCA], [http://www.ebi.ac.uk/pdbsum/2kbd PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2kbd RCSB]</span>
}}


'''5'-D(*CP*TP*GP*GP*GP*GP*AP*CP*TP*TP*TP*CP*CP*AP*GP*G)-3', 5'-D(*CP*CP*TP*GP*GP*AP*AP*AP*GP*TP*CP*CP*CP*CP*AP*G)-3''''
'''5'-D(*CP*TP*GP*GP*GP*GP*AP*CP*TP*TP*TP*CP*CP*AP*GP*G)-3', 5'-D(*CP*CP*TP*GP*GP*AP*AP*AP*GP*TP*CP*CP*CP*CP*AP*G)-3''''
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==About this Structure==
==About this Structure==
2KBD is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KBD OCA].  
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KBD OCA].  


==Reference==
==Reference==
Solution structure of a non-palindromic 16 base-pair DNA related to the HIV-1 kappa B site: evidence for BI-BII equilibrium inducing a global dynamic curvature of the duplex., Tisne C, Hantz E, Hartmann B, Delepierre M, J Mol Biol. 1998 May 29;279(1):127-42. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9636705 9636705]
Solution structure of a non-palindromic 16 base-pair DNA related to the HIV-1 kappa B site: evidence for BI-BII equilibrium inducing a global dynamic curvature of the duplex., Tisne C, Hantz E, Hartmann B, Delepierre M, J Mol Biol. 1998 May 29;279(1):127-42. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9636705 9636705]
[[Category: Protein complex]]
[[Category: Delepierre, M.]]
[[Category: Delepierre, M.]]
[[Category: Hantz, E.]]
[[Category: Hantz, E.]]
[[Category: Hartmann, B.]]
[[Category: Hartmann, B.]]
[[Category: Tisne, C.]]
[[Category: Tisne, C.]]
[[Category: deoxyribonucleic acid]]
[[Category: Deoxyribonucleic acid]]
[[Category: dna structure]]
[[Category: Dna structure]]
[[Category: modelling]]
[[Category: Modelling]]
[[Category: nmr]]
[[Category: Nmr]]
 
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