|
|
| Line 1: |
Line 1: |
| [[Image:2oyq.gif|left|200px]] | | [[Image:2oyq.gif|left|200px]] |
|
| |
|
| {{Structure
| | <!-- |
| |PDB= 2oyq |SIZE=350|CAPTION= <scene name='initialview01'>2oyq</scene>, resolution 2.86Å
| | The line below this paragraph, containing "STRUCTURE_2oyq", creates the "Structure Box" on the page. |
| |SITE= <scene name='pdbsite=AC1:3dr+Binding+Site+For+Residue+E+6'>AC1</scene>, <scene name='pdbsite=AC2:N5i+Binding+Site+For+Residue+F+115'>AC2</scene>, <scene name='pdbsite=AC3:3dr+Binding+Site+For+Residue+I+6'>AC3</scene>, <scene name='pdbsite=AC4:N5i+Binding+Site+For+Residue+J+115'>AC4</scene>, <scene name='pdbsite=AC5:Mg+Binding+Site+For+Residue+I+802'>AC5</scene>, <scene name='pdbsite=AC6:N5p+Binding+Site+For+Residue+C+904'>AC6</scene>, <scene name='pdbsite=AC7:N5p+Binding+Site+For+Residue+A+904'>AC7</scene>, <scene name='pdbsite=AC8:N5p+Binding+Site+For+Residue+A+905'>AC8</scene> and <scene name='pdbsite=AC9:N5p+Binding+Site+For+Residue+I+704'>AC9</scene>
| | You may change the PDB parameter (which sets the PDB file loaded into the applet) |
| |LIGAND= <scene name='pdbligand=3DR:1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE'>3DR</scene>, <scene name='pdbligand=DA:2'-DEOXYADENOSINE-5'-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5'-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=N5I:1-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYL)-5-NITRO-1H-INDOLE'>N5I</scene>, <scene name='pdbligand=N5P:1-{2-DEOXY-5-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}PHOSPHORYL]-BETA-D-ERYTHRO-PENTOFURANOSYL}-5-NITRO-1H-INDOLE'>N5P</scene>
| | or the SCENE parameter (which sets the initial scene displayed when the page is loaded), |
| |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span>
| | or leave the SCENE parameter empty for the default display. |
| |GENE= 43 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=12353 Enterobacteria phage RB69]) | | --> |
| |DOMAIN= | | {{STRUCTURE_2oyq| PDB=2oyq | SCENE= }} |
| |RELATEDENTRY=[[1ig9|1IG9]], [[1rv2|1RV2]], [[2ozm|2OZM]], [[2ozs|2OZS]], [[2p5g|2P5G]]
| |
| |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2oyq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oyq OCA], [http://www.ebi.ac.uk/pdbsum/2oyq PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2oyq RCSB]</span>
| |
| }} | |
|
| |
|
| '''Crystal structure of RB69 gp43 in complex with DNA with 5-NIMP opposite an abasic site analog''' | | '''Crystal structure of RB69 gp43 in complex with DNA with 5-NIMP opposite an abasic site analog''' |
| Line 31: |
Line 28: |
| [[Category: Zahn, K E.]] | | [[Category: Zahn, K E.]] |
| [[Category: 5-nitp]] | | [[Category: 5-nitp]] |
| [[Category: abasic site]] | | [[Category: Abasic site]] |
| [[Category: dna lesion]] | | [[Category: Dna lesion]] |
| [[Category: dna polymerase]] | | [[Category: Dna polymerase]] |
| [[Category: nucleotide binding]] | | [[Category: Nucleotide binding]] |
| [[Category: transferase/dna complex]] | | [[Category: Transferase/dna complex]] |
| | | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 11:56:48 2008'' |
| ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:25:10 2008'' | |
