Sigma factor: Difference between revisions

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**[[3mzy]] – SF-H – ''Fusobacterium nucleatum''<br />
**[[3mzy]] – SF-H – ''Fusobacterium nucleatum''<br />
**[[1h3l]] – ScSF N terminal – ''Streptomyces coelicolor''<br />
**[[1h3l]] – ScSF N terminal – ''Streptomyces coelicolor''<br />
**[[5fgm]] – ScSF SIGR region 4<br />
**[[5fgm]] – ScSF-R region 4<br />
**[[5mww]] – BsSF SIGA region 1.1 - ''Bacillus subtilis'' - NMR <br />
**[[5mww]] – BsSF-A region 1.1 - ''Bacillus subtilis'' - NMR <br />
**[[5xe7]] – MtSF-J – ''Mycobacterium tuberculosis''<br />


*Sigma factor complex with DNA
*Sigma factor complex with DNA
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**[[1rp3]], [[1sc5]] – AaSF-28 + anti-σ factor FLGM <br />
**[[1rp3]], [[1sc5]] – AaSF-28 + anti-σ factor FLGM <br />
**[[5wuq]] – BsSF SIGW + anti-σ factor RSIW  <br />
**[[5wuq]] – BsSF SIGW + anti-σ factor RSIW  <br />
**[[3hug]] – MtSF + membrane protein – ''Mycobacterium tuberculosis''<br />
**[[3hug]] – MtSF-L + membrane protein <br />
**[[4nqw]] – MtSF-K region 4 + anti-σ factor<br />
**[[4nqw]] – MtSF-K region 4 + anti-σ factor<br />
**[[4x8k]] – MtSF-A region 2 + RBPA<br />
**[[4x8k]] – MtSF-A region 2 + RBPA<br />
**[[6fbv]] – MtSF-A + RNAP subunits α,β,β’,ω - SP Cryo EM<br />
**[[6c05]], [[6c06]] – MtSF-A + RNAP subunits α,β,β’,ω + RbpA - Cryo EM<br />
**[[3wod]], [[2a6e]], [[2cw0]], [[5tmf]] – TtSF + RNAP subunits α,β,β’,ω - ''Thermus thermophilus'' <br />
**[[3wod]], [[2a6e]], [[2cw0]], [[5tmf]] – TtSF + RNAP subunits α,β,β’,ω - ''Thermus thermophilus'' <br />
**[[4mq9]], [[2a68]], [[2a69]], [[2a6h]], [[3dxj]], [[3eql]] – TtSF ProD + RNAP subunits α,β,β’,ω + antibiotic <br />
**[[4mq9]], [[2a68]], [[2a69]], [[2a6h]], [[3dxj]], [[3eql]] – TtSF ProD + RNAP subunits α,β,β’,ω + antibiotic <br />
**[[2be5]] – TtSF + RNAP subunits α,β,β’,ω + inhibitor<br />
**[[2be5]] – TtSF + RNAP subunits α,β,β’,ω + inhibitor<br />
**[[5tmc]] – TtSF SIGA + RNAP subunits α,β,β’,ω + protein + G4P<br />
**[[5tmc]] – TtSF-A + RNAP subunits α,β,β’,ω + protein + G4P<br />
**[[5xj0]] – TtSF-A + RNAP subunits α,β,β’,ω + GP39 + GP76<br />
**[[5x22]] – TtSF-A + RNAP subunits α,β,β’,ω + GpA + CMPcPP<br />
**[[1l9u]] – TaSF region 1.1-4 + RNAP subunits α,β,β’,ω<br />
**[[1l9u]] – TaSF region 1.1-4 + RNAP subunits α,β,β’,ω<br />
**[[4yg2]], [[5uag]], [[5uaj]], [[5uaq]] – EcSF ProD + RNAP subunits α,β,β’,ω  <br />
**[[4yg2]], [[5uag]], [[5uaj]], [[5uaq]] – EcSF ProD + RNAP subunits α,β,β’,ω  <br />
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**[[4mex]], [[4kmu]], [[4kn4]], [[4kn7]], [[5uac]], [[5uah]], [[5ual]], [[4zh3]], [[4zh4]] – EcSF ProD + RNAP subunits α,β,β’,ω + antibiotic <br />
**[[4mex]], [[4kmu]], [[4kn4]], [[4kn7]], [[5uac]], [[5uah]], [[5ual]], [[4zh3]], [[4zh4]] – EcSF ProD + RNAP subunits α,β,β’,ω + antibiotic <br />
**[[4xsx]], [[4xsy]], [[4xsz]] – EcSF ProD + RNAP subunits α,β,β’,ω + antibiotic <br />
**[[4xsx]], [[4xsy]], [[4xsz]] – EcSF ProD + RNAP subunits α,β,β’,ω + antibiotic <br />
**[[4mey]], [[4ljz]], [[4lk1]] – EcSF ProD + RNAP subunits α,β,β’,ω <br />
**[[6byu]] – EcSF ProD + RNAP subunits α,β,β’,ω + ppApp <br />
**[[4mey]], [[4ljz]], [[4lk1]], [[6cux]] – EcSF ProD + RNAP subunits α,β,β’,ω <br />
**[[6c9y]], [[6ca0]] – EcSF ProD + RNAP subunits α,β,β’,ω - Cryo EM<br />
**[[5byh]] – EcSF-45 + RNAP subunits α,β,β’,ω <br />
**[[5byh]] – EcSF-45 + RNAP subunits α,β,β’,ω <br />
**[[5nwt]] – EcSF-54 + RNAP subunits α,β,β’,ω <br />
**[[5nwt]] – EcSF-54 + RNAP subunits α,β,β’,ω <br />
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**[[4cxf]] – SF CNRH + CNRY – ''Cupriavidus metallidurans''<br />
**[[4cxf]] – SF CNRH + CNRY – ''Cupriavidus metallidurans''<br />
**[[4g6d]], [[4g8x]], [[4g94]] – SF ProD region 4 + Orf067 – ''Staphylococcus aureus''<br />
**[[4g6d]], [[4g8x]], [[4g94]] – SF ProD region 4 + Orf067 – ''Staphylococcus aureus''<br />
**[[5yix]] – SF RpoD + GCRA - ''Caulobacter crescentus''<br />


*Sigma factor complex with protein and DNA
*Sigma factor complex with protein and DNA
Line 101: Line 109:
**[[4xlp]], [[4xlq]], [[5tjg]] – TaSF SIGA + RNAP subunits α,β,β’,ω + DNA  <br />
**[[4xlp]], [[4xlq]], [[5tjg]] – TaSF SIGA + RNAP subunits α,β,β’,ω + DNA  <br />
**[[1l9u]], [[1l9z]] – TaSF + RNAP subunits α,β,β’,ω + DNA – Cryo EM  <br />
**[[1l9u]], [[1l9z]] – TaSF + RNAP subunits α,β,β’,ω + DNA – Cryo EM  <br />
**[[4xlr]], [[4xls]] – TaSF SIGA + RNAP subunits α,β,β’,ω + CarD-like transcriptional regulator + DNA  <br />
**[[4xlr]], [[4xls]] – TaSF-A + RNAP subunits α,β,β’,ω + CarD-like transcriptional regulator + DNA  <br />
**[[3iyd]] – EcSF ProD + EcRNAP subunits α,β,β’,ω + catabolite gene activator + DNA<br />
**[[3iyd]] – EcSF ProD + EcRNAP subunits α,β,β’,ω + catabolite gene activator + DNA<br />
**[[4jk1]], [[4jk2]], [[4jkr]] – EcSF ProD + EcRNAP subunits α,β,β’,ω + G4P<br />
**[[4jk1]], [[4jk2]], [[4jkr]] – EcSF ProD + EcRNAP subunits α,β,β’,ω + G4P<br />
**[[4yln]], [[4ylo]], [[4ylp]] – EcSF ProD + EcRNAP subunits α,β,β’,ω + DNA<br />
**[[4yln]], [[4ylo]], [[4ylp]] – EcSF ProD + EcRNAP subunits α,β,β’,ω + DNA<br />
**[[5nss]] – EcSF-54 + EcRNAP subunits α,β,β’,ω + phage shock protein F + DNA - Cryo EM<br />
**[[5nss]] – EcSF-54 + EcRNAP subunits α,β,β’,ω + phage shock protein F + DNA - Cryo EM<br />
**[[5nsr]] – EcSF-54 + EcRNAP subunits α,β,β’,ω + DNA - Cryo EM<br />
**[[5nsr]], [[6gh6]], [[6gh5]], [[6gfw]] – EcSF-54 + EcRNAP subunits α,β,β’,ω + DNA - Cryo EM<br />
**[[5voi]] – TtSF SIGA + TtRNAP subunits α,β,β’,ω + DNA <br />
**[[5voi]] – TtSF-A + TtRNAP subunits α,β,β’,ω + DNA <br />
**[[5d4c]] – TtSF SIGA + TtRNAP subunits α,β,β’,ω + DNA + CTP + ATP<br />
**[[6cuu]] – TtSF-A + TtRNAP subunits α,β,β’,ω + DNA + antibiotic<br />
**[[5d4d]] – TtSF SIGA + TtRNAP subunits α,β,β’,ω + DNA + CTP + NAD<br />
**[[5d4c]] – TtSF-A + TtRNAP subunits α,β,β’,ω + DNA + CTP + ATP<br />
**[[5d4e]] – TtSF SIGA + TtRNAP subunits α,β,β’,ω + DNA + CTP + dephosphate-CoA<br />
**[[5d4d]] – TtSF-A + TtRNAP subunits α,β,β’,ω + DNA + CTP + NAD<br />
**[[5uha]] – MtSF SIGA + MtRNAP subunits α,β,β’,ω + DNA <br />
**[[5d4e]] – TtSF-A + TtRNAP subunits α,β,β’,ω + DNA + CTP + dephosphate-CoA<br />
**[[5uha]] – MtSF-A + MtRNAP subunits α,β,β’,ω + DNA <br />
**[[6c04]] – MtSF-A + RNAP subunits α,β,β’,ω + RbpA + DNA - Cryo EM<br />
**[[5uhe]], [[5uhf]] – MtSF SIGA + MtRNAP subunits α,β,β’,ω + DNA + inhibitor<br />
**[[5uhe]], [[5uhf]] – MtSF SIGA + MtRNAP subunits α,β,β’,ω + DNA + inhibitor<br />
**[[5uhg]] – MtSF SIGA + MtRNAP subunits α,β,β’,ω + DNA + antibiotic + inhibitor<br />
**[[5uhg]] – MtSF-A + MtRNAP subunits α,β,β’,ω + DNA + antibiotic + inhibitor<br />
**[[5uhb]] – MtSF SIGA + MtRNAP subunits α,β,β’,ω + DNA + antibiotic<br />
**[[5uhb]] – MtSF-A + MtRNAP subunits α,β,β’,ω + DNA + antibiotic<br />
**[[5tw1]] – MsSF SIGA + MtRNAP subunits α,β,β’,ω + DNA + peptide - ''Mycobacterium smegmatis''<br />
**[[6bzo]] – MtSF-A + RNAP subunits α,β,β’,ω + RbpA + DNA + antibiotic - Cryo EM<br />
**[[5vi8]] – MsSF SIGA + MsRNAP subunits α,β,β’,ω + DNA <br />
**[[5tw1]], [[6cce]] – MsSF-A + MtRNAP subunits α,β,β’,ω + DNA + peptide - ''Mycobacterium smegmatis''<br />
**[[5vi8]] – MsSF-A + MsRNAP subunits α,β,β’,ω + DNA <br />
**[[6ccv]] – MsSF-A + MtRNAP subunits α,β,β’,ω + DNA + peptide + RbpA <br />
**[[6ccf]] – MsSF-A + MtRNAP subunits α,β,β’,ω + DNA + peptide + antibiotic<br />


*Sigma factor complex with protein, DNA and RNA
*Sigma factor complex with protein, DNA and RNA


**[[5vi5]] – MsSF SIGA + MsRNAP subunits α,β,β’,ω + RbpA + DNA + RNA<br />
**[[5vi5]] – MsSF-A + MsRNAP subunits α,β,β’,ω + RbpA + DNA + RNA<br />
**[[4xln]] – TaSF SIGA + RNAP subunits α,β,β’,ω + DNA + RNA  <br />
**[[4xln]] – TaSF-A + RNAP subunits α,β,β’,ω + DNA + RNA  <br />
**[[5ipl]], [[5ipm]], [[5ipn]] – EcSF RpoS + EcRNAP subunits α,β,β’,ω + DNA + RNA<br />
**[[5ipl]], [[5ipm]], [[5ipn]] – EcSF RpoS + EcRNAP subunits α,β,β’,ω + DNA + RNA<br />
**[[5e17]], [[5e18]] – TtSF SIGA + TtRNAP subunits α,β,β’,ω + DNA + RNA<br />
**[[6b6h]] – EcSF RpoD + EcRNAP subunits α,β,β’,ω + DNA + RNA - Cryo EM<br />
**[[5x22]] – TtSF SIGA + TtRNAP subunits α,β,β’,ω + DNA + RNA + CMPPP<br />
**[[5e17]], [[5e18]] – TtSF-A + TtRNAP subunits α,β,β’,ω + DNA + RNA<br />
**[[5vo8]] – TtSF SIGA + TtRNAP subunits α,β,β’,ω + DNA + RNA + GTP<br />
**[[5x22]] – TtSF-A + TtRNAP subunits α,β,β’,ω + DNA + RNA + CMPPP<br />
**[[5i2d]] – TtSF SIGA + TtRNAP subunits α,β,β’,ω + transcriptional regulator + DNA + RNA<br />
**[[5vo8]] – TtSF-A + TtRNAP subunits α,β,β’,ω + DNA + RNA + GTP<br />
**[[5uh5]], [[5uh8]], [[5uh9]] – MtSF SIGA + MtRNAP subunits α,β,β’,ω + DNA + RNA<br />
**[[5x21]] – TtSF-A + TtRNAP subunits α,β,β’,ω + DNA + RNA + antibiotic<br />
**[[5uh6]], [[5uhc]], [[5uhd]], [[5x21]] – MtSF SIGA + TtRNAP subunits α,β,β’,ω + DNA + RNA + antibiotic<br />
**[[5i2d]] – TtSF-A + TtRNAP subunits α,β,β’,ω + transcriptional regulator + DNA + RNA<br />
**[[5uh5]], [[5uh8]], [[5uh9]] – MtSF-A + MtRNAP subunits α,β,β’,ω + DNA + RNA<br />
**[[5uh6]], [[5uhc]], [[5uhd]], [[5x21]] – MtSF-A + TtRNAP subunits α,β,β’,ω + DNA + RNA + antibiotic<br />
}}
}}
== References ==
== References ==
Retrieved from "https://proteopedia.org/Sigma_factor"