6icm: Difference between revisions
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==Pseudomonas putida CBB5 NdmA with ferredoxin domain of NdmD== | |||
<StructureSection load='6icm' size='340' side='right'caption='[[6icm]], [[Resolution|resolution]] 2.96Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[6icm]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ICM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ICM FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.961Å</td></tr> | |||
[[Category: | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr> | ||
[[Category: | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6icm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6icm OCA], [https://pdbe.org/6icm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6icm RCSB], [https://www.ebi.ac.uk/pdbsum/6icm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6icm ProSAT]</span></td></tr> | ||
[[Category: Kang | </table> | ||
[[Category: | == Function == | ||
[[Category: Kim | [https://www.uniprot.org/uniprot/NDMA_PSEPU NDMA_PSEPU] Involved in the caffeine degradation, which is the essential first step for assimilating the carbon and nitrogen in caffeine. Catalyzes the N1-demethylation of caffeine to produce theobromine and formaldehyde. Also catalyzes the N1-demethylation of theophylline, paraxanthine, and 1-methylxanthine to 3-methylxanthine, 7-methylxanthine, and xanthine, respectively. NADH is the preferred substrate.<ref>PMID:20966097</ref> <ref>PMID:22328667</ref> | ||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Pseudomonas putida]] | |||
[[Category: Kang SY]] | |||
[[Category: Kim BH]] | |||
[[Category: Kim JH]] | |||
[[Category: Song HK]] | |||
Revision as of 10:32, 27 March 2024
Pseudomonas putida CBB5 NdmA with ferredoxin domain of NdmD
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