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==Structure of the alanine racemase from Staphylococcus aureus in complex with a pyridoxal 5' phosphate-derivative==
==Structure of the alanine racemase from Staphylococcus aureus in complex with a pyridoxal 5' phosphate-derivative==
<StructureSection load='6g58' size='340' side='right' caption='[[6g58]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='6g58' size='340' side='right'caption='[[6g58]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6g58]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staam Staam]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G58 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6G58 FirstGlance]. <br>
<table><tr><td colspan='2'>[[6g58]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_Mu50 Staphylococcus aureus subsp. aureus Mu50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G58 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6G58 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EOW:(6-but-3-ynyl-4-methyl-5-oxidanyl-pyridin-3-yl)methyl+dihydrogen+phosphate'>EOW</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">alr1, alr, SAV2070 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=158878 STAAM])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EOW:(6-but-3-ynyl-4-methyl-5-oxidanyl-pyridin-3-yl)methyl+dihydrogen+phosphate'>EOW</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alanine_racemase Alanine racemase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.1.1 5.1.1.1] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6g58 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g58 OCA], [https://pdbe.org/6g58 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6g58 RCSB], [https://www.ebi.ac.uk/pdbsum/6g58 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6g58 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6g58 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g58 OCA], [http://pdbe.org/6g58 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6g58 RCSB], [http://www.ebi.ac.uk/pdbsum/6g58 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6g58 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/ALR1_STAAM ALR1_STAAM]] Catalyzes the interconversion of L-alanine and D-alanine.<ref>PMID:22194336</ref>
[https://www.uniprot.org/uniprot/ALR1_STAAM ALR1_STAAM] Catalyzes the interconversion of L-alanine and D-alanine.<ref>PMID:22194336</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6g58" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6g58" style="background-color:#fffaf0;"></div>
==See Also==
*[[Alanine racemase 3D structures|Alanine racemase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Alanine racemase]]
[[Category: Large Structures]]
[[Category: Staam]]
[[Category: Staphylococcus aureus subsp. aureus Mu50]]
[[Category: Hoegl, A]]
[[Category: Hoegl A]]
[[Category: Schneider, S]]
[[Category: Schneider S]]
[[Category: Sieber, S A]]
[[Category: Sieber SA]]
[[Category: Biosynthetic protein]]
[[Category: D-alanine biosynthesis]]
[[Category: Pyridoxal 5 phosphate dependent]]

Latest revision as of 09:57, 23 October 2024

Structure of the alanine racemase from Staphylococcus aureus in complex with a pyridoxal 5' phosphate-derivative

6g58, resolution 1.90Å

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