2rdg: Difference between revisions

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[[Image:2rdg.jpg|left|200px]]
[[Image:2rdg.jpg|left|200px]]


{{Structure
<!--
|PDB= 2rdg |SIZE=350|CAPTION= <scene name='initialview01'>2rdg</scene>, resolution 1.60&Aring;
The line below this paragraph, containing "STRUCTURE_2rdg", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=
or leave the SCENE parameter empty for the default display.
|GENE= SSL11 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])
-->
|DOMAIN=
{{STRUCTURE_2rdg| PDB=2rdg  | SCENE= }}  
|RELATEDENTRY=[[2rdh|2RDH]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rdg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rdg OCA], [http://www.ebi.ac.uk/pdbsum/2rdg PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2rdg RCSB]</span>
}}


'''Crystal structure of Staphylococcal Superantigen-Like protein 11 in complex with Sialyl Lewis X'''
'''Crystal structure of Staphylococcal Superantigen-Like protein 11 in complex with Sialyl Lewis X'''
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[[Category: Langley, R J.]]
[[Category: Langley, R J.]]
[[Category: Wines, B D.]]
[[Category: Wines, B D.]]
[[Category: beta grasp]]
[[Category: Beta grasp]]
[[Category: ob fold]]
[[Category: Ob fold]]
[[Category: protein-carbohydrate complex]]
[[Category: Protein-carbohydrate complex]]
[[Category: toxin]]
[[Category: Toxin]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 16:41:17 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:59:06 2008''

Revision as of 13:41, 4 May 2008

File:2rdg.jpg

Template:STRUCTURE 2rdg

Crystal structure of Staphylococcal Superantigen-Like protein 11 in complex with Sialyl Lewis X


Overview

Staphylococcus aureus is a major pathogen that produces a family of 14 staphylococcal superantigen-like (SSL) proteins, which are structurally similar to superantigens but do not stimulate T cells. SSL11 is one member of the family that is found in all staphylococcal strains. Recombinant SSL11 bound to granulocytes and monocytes through a sialic acid-dependent mechanism and was rapidly internalized. SSL11 also bound to sialic acid-containing glycoproteins, such as the Fc receptor for IgA (FcalphaRI) and P-selectin glycoprotein ligand-1 (PSGL-1), and inhibited neutrophil attachment to a P-selectin-coated surface. Biosensor analysis of two SSL11 alleles binding to sialyl Lewis X [sLe(x)- Neu5Acalpha2-3Galbeta1-4(Fuc1-3)GlcNAc] coupled to bovine serum albumin gave dissociation constants of 0.7 and 7 mum respectively. Binding of SSL11 to a glycan array revealed specificity for glycans containing the trisaccharide sialyllactosamine (sLacNac - Neu5Acalpha2-3Galbeta1-4GlcNAc). A 1.6 A resolution crystal structure of SSL11 complexed with sLe(x) revealed a discrete binding site in the C-terminal beta-grasp domain, with predominant interactions with the sialic acid and galactose residues. A single amino acid mutation in the carbohydrate binding site abolished all SSL11 binding. Thus, SSL11 is a staphylococcal protein that targets myeloid cells by binding sialyllactosamine-containing glycoproteins.

About this Structure

2RDG is a Single protein structure of sequence from Staphylococcus aureus. Full crystallographic information is available from OCA.

Reference

The crystal structure of staphylococcal superantigen-like protein 11 in complex with sialyl Lewis X reveals the mechanism for cell binding and immune inhibition., Chung MC, Wines BD, Baker H, Langley RJ, Baker EN, Fraser JD, Mol Microbiol. 2007 Dec;66(6):1342-55. PMID:18045383 Page seeded by OCA on Sun May 4 16:41:17 2008

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