2rdz: Difference between revisions

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[[Image:2rdz.jpg|left|200px]]
[[Image:2rdz.jpg|left|200px]]


{{Structure
<!--
|PDB= 2rdz |SIZE=350|CAPTION= <scene name='initialview01'>2rdz</scene>, resolution 1.740&Aring;
The line below this paragraph, containing "STRUCTURE_2rdz", creates the "Structure Box" on the page.
|SITE= <scene name='pdbsite=AC1:Ca+Binding+Site+For+Residue+A+1501'>AC1</scene>, <scene name='pdbsite=AC2:Ca+Binding+Site+For+Residue+A+1502'>AC2</scene>, <scene name='pdbsite=AC3:Ca+Binding+Site+For+Residue+B+1501'>AC3</scene>, <scene name='pdbsite=AC4:Ca+Binding+Site+For+Residue+B+1502'>AC4</scene>, <scene name='pdbsite=AC5:Ca+Binding+Site+For+Residue+C+1501'>AC5</scene>, <scene name='pdbsite=AC6:Ca+Binding+Site+For+Residue+C+1502'>AC6</scene>, <scene name='pdbsite=AC7:Ca+Binding+Site+For+Residue+D+1501'>AC7</scene>, <scene name='pdbsite=AC8:Ca+Binding+Site+For+Residue+D+1502'>AC8</scene>, <scene name='pdbsite=AC9:So4+Binding+Site+For+Residue+D+2001'>AC9</scene>, <scene name='pdbsite=BC1:So4+Binding+Site+For+Residue+A+2001'>BC1</scene>, <scene name='pdbsite=BC2:So4+Binding+Site+For+Residue+B+2001'>BC2</scene>, <scene name='pdbsite=BC3:So4+Binding+Site+For+Residue+C+2001'>BC3</scene>, <scene name='pdbsite=BC4:Hec+Binding+Site+For+Residue+A+1'>BC4</scene>, <scene name='pdbsite=BC5:Hec+Binding+Site+For+Residue+A+2'>BC5</scene>, <scene name='pdbsite=BC6:Hec+Binding+Site+For+Residue+A+3'>BC6</scene>, <scene name='pdbsite=BC7:Hec+Binding+Site+For+Residue+A+4'>BC7</scene>, <scene name='pdbsite=BC8:Hec+Binding+Site+For+Residue+A+5'>BC8</scene>, <scene name='pdbsite=BC9:Hec+Binding+Site+For+Residue+B+1'>BC9</scene>, <scene name='pdbsite=CC1:Hec+Binding+Site+For+Residue+B+2'>CC1</scene>, <scene name='pdbsite=CC2:Hec+Binding+Site+For+Residue+B+3'>CC2</scene>, <scene name='pdbsite=CC3:Hec+Binding+Site+For+Residue+B+4'>CC3</scene>, <scene name='pdbsite=CC4:Hec+Binding+Site+For+Residue+B+5'>CC4</scene>, <scene name='pdbsite=CC5:Hec+Binding+Site+For+Residue+C+1'>CC5</scene>, <scene name='pdbsite=CC6:Hec+Binding+Site+For+Residue+C+2'>CC6</scene>, <scene name='pdbsite=CC7:Hec+Binding+Site+For+Residue+C+3'>CC7</scene>, <scene name='pdbsite=CC8:Hec+Binding+Site+For+Residue+C+4'>CC8</scene>, <scene name='pdbsite=CC9:Hec+Binding+Site+For+Residue+C+5'>CC9</scene>, <scene name='pdbsite=DC1:Hec+Binding+Site+For+Residue+D+1'>DC1</scene>, <scene name='pdbsite=DC2:Hec+Binding+Site+For+Residue+D+2'>DC2</scene>, <scene name='pdbsite=DC3:Hec+Binding+Site+For+Residue+D+3'>DC3</scene>, <scene name='pdbsite=DC4:Hec+Binding+Site+For+Residue+D+4'>DC4</scene>, <scene name='pdbsite=DC5:Hec+Binding+Site+For+Residue+D+5'>DC5</scene>, <scene name='pdbsite=DC6:Edo+Binding+Site+For+Residue+D+481'>DC6</scene>, <scene name='pdbsite=DC7:Edo+Binding+Site+For+Residue+D+482'>DC7</scene>, <scene name='pdbsite=DC8:Edo+Binding+Site+For+Residue+A+481'>DC8</scene>, <scene name='pdbsite=DC9:Edo+Binding+Site+For+Residue+B+481'>DC9</scene>, <scene name='pdbsite=EC1:Edo+Binding+Site+For+Residue+C+481'>EC1</scene>, <scene name='pdbsite=EC2:Edo+Binding+Site+For+Residue+D+6'>EC2</scene>, <scene name='pdbsite=EC3:Edo+Binding+Site+For+Residue+A+11'>EC3</scene>, <scene name='pdbsite=EC4:Edo+Binding+Site+For+Residue+C+12'>EC4</scene>, <scene name='pdbsite=EC5:Edo+Binding+Site+For+Residue+A+13'>EC5</scene>, <scene name='pdbsite=EC6:Edo+Binding+Site+For+Residue+A+14'>EC6</scene>, <scene name='pdbsite=EC7:Edo+Binding+Site+For+Residue+A+15'>EC7</scene>, <scene name='pdbsite=EC8:Edo+Binding+Site+For+Residue+B+16'>EC8</scene>, <scene name='pdbsite=EC9:Edo+Binding+Site+For+Residue+B+17'>EC9</scene>, <scene name='pdbsite=FC1:Edo+Binding+Site+For+Residue+B+18'>FC1</scene>, <scene name='pdbsite=FC2:Edo+Binding+Site+For+Residue+B+19'>FC2</scene>, <scene name='pdbsite=FC3:Edo+Binding+Site+For+Residue+A+20'>FC3</scene>, <scene name='pdbsite=FC4:Edo+Binding+Site+For+Residue+C+21'>FC4</scene>, <scene name='pdbsite=FC5:Edo+Binding+Site+For+Residue+C+22'>FC5</scene>, <scene name='pdbsite=FC6:Edo+Binding+Site+For+Residue+C+23'>FC6</scene>, <scene name='pdbsite=FC7:Edo+Binding+Site+For+Residue+D+24'>FC7</scene>, <scene name='pdbsite=FC8:Edo+Binding+Site+For+Residue+C+25'>FC8</scene>, <scene name='pdbsite=FC9:Edo+Binding+Site+For+Residue+D+26'>FC9</scene>, <scene name='pdbsite=GC1:Edo+Binding+Site+For+Residue+A+27'>GC1</scene>, <scene name='pdbsite=GC2:Edo+Binding+Site+For+Residue+D+28'>GC2</scene>, <scene name='pdbsite=GC3:Edo+Binding+Site+For+Residue+B+29'>GC3</scene>, <scene name='pdbsite=GC4:Edo+Binding+Site+For+Residue+D+30'>GC4</scene>, <scene name='pdbsite=GC5:Edo+Binding+Site+For+Residue+D+31'>GC5</scene> and <scene name='pdbsite=GC6:Edo+Binding+Site+For+Residue+A+32'>GC6</scene>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Nitrite_reductase_(cytochrome;_ammonia-forming) Nitrite reductase (cytochrome; ammonia-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.2 1.7.2.2] </span>
or leave the SCENE parameter empty for the default display.
|GENE=  
-->
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3303 NrfA]</span>
{{STRUCTURE_2rdz| PDB=2rdz  | SCENE= }}  
|RELATEDENTRY=[[2rf7|2RF7]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rdz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rdz OCA], [http://www.ebi.ac.uk/pdbsum/2rdz PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2rdz RCSB]</span>
}}


'''High Resolution Crystal Structure of the Escherichia coli Cytochrome c Nitrite Reductase.'''
'''High Resolution Crystal Structure of the Escherichia coli Cytochrome c Nitrite Reductase.'''
Line 24: Line 21:
Role of a Conserved Glutamine Residue in Tuning the Catalytic Activity of Escherichia coli Cytochrome c Nitrite Reductase., Clarke TA, Kemp GL, Wonderen JH, Doyle RM, Cole JA, Tovell N, Cheesman MR, Butt JN, Richardson DJ, Hemmings AM, Biochemistry. 2008 Mar 25;47(12):3789-3799. Epub 2008 Mar 1. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18311941 18311941]
Role of a Conserved Glutamine Residue in Tuning the Catalytic Activity of Escherichia coli Cytochrome c Nitrite Reductase., Clarke TA, Kemp GL, Wonderen JH, Doyle RM, Cole JA, Tovell N, Cheesman MR, Butt JN, Richardson DJ, Hemmings AM, Biochemistry. 2008 Mar 25;47(12):3789-3799. Epub 2008 Mar 1. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18311941 18311941]
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Nitrite reductase (cytochrome; ammonia-forming)]]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Clarke, T A.]]
[[Category: Clarke, T A.]]
[[Category: Hemmings, A M.]]
[[Category: Hemmings, A M.]]
[[Category: RIchardson, D J.]]
[[Category: RIchardson, D J.]]
[[Category: calcium]]
[[Category: Calcium]]
[[Category: decaheme]]
[[Category: Decaheme]]
[[Category: electron transport]]
[[Category: Electron transport]]
[[Category: iron]]
[[Category: Iron]]
[[Category: metal-binding]]
[[Category: Metal-binding]]
[[Category: oxidoreductase]]
[[Category: Oxidoreductase]]
[[Category: periplasm]]
[[Category: Periplasm]]
[[Category: reductase]]
[[Category: Reductase]]
[[Category: transport]]
[[Category: Transport]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 16:43:19 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:59:22 2008''
Retrieved from "https://proteopedia.org/2rdz"