2ri9: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
Line 1: Line 1:
[[Image:2ri9.jpg|left|200px]]
[[Image:2ri9.jpg|left|200px]]


{{Structure
<!--
|PDB= 2ri9 |SIZE=350|CAPTION= <scene name='initialview01'>2ri9</scene>, resolution 1.95&Aring;
The line below this paragraph, containing "STRUCTURE_2ri9", creates the "Structure Box" on the page.
|SITE= <scene name='pdbsite=AC1:Nag+Binding+Site+For+Residue+A+1600'>AC1</scene>, <scene name='pdbsite=AC2:Nag+Binding+Site+For+Residue+A+1601'>AC2</scene>, <scene name='pdbsite=AC3:Nag+Binding+Site+For+Residue+A+1700'>AC3</scene>, <scene name='pdbsite=AC4:Ndg+Binding+Site+For+Residue+A+1701'>AC4</scene>, <scene name='pdbsite=AC5:Man+Binding+Site+For+Residue+A+1702'>AC5</scene>, <scene name='pdbsite=AC6:Man+Binding+Site+For+Residue+A+1703'>AC6</scene>, <scene name='pdbsite=AC7:Man+Binding+Site+For+Residue+A+1704'>AC7</scene>, <scene name='pdbsite=AC8:Nag+Binding+Site+For+Residue+A+1800'>AC8</scene>, <scene name='pdbsite=AC9:Nag+Binding+Site+For+Residue+A+1801'>AC9</scene>, <scene name='pdbsite=BC1:Ldy+Binding+Site+For+Residue+A+1900'>BC1</scene>, <scene name='pdbsite=BC2:Mma+Binding+Site+For+Residue+A+1901'>BC2</scene>, <scene name='pdbsite=BC3:Nag+Binding+Site+For+Residue+B+2600'>BC3</scene>, <scene name='pdbsite=BC4:Nag+Binding+Site+For+Residue+B+2700'>BC4</scene>, <scene name='pdbsite=BC5:Ndg+Binding+Site+For+Residue+B+2701'>BC5</scene>, <scene name='pdbsite=BC6:Man+Binding+Site+For+Residue+B+2702'>BC6</scene>, <scene name='pdbsite=BC7:Man+Binding+Site+For+Residue+B+2703'>BC7</scene>, <scene name='pdbsite=BC8:Man+Binding+Site+For+Residue+B+2704'>BC8</scene>, <scene name='pdbsite=BC9:Nag+Binding+Site+For+Residue+B+2800'>BC9</scene>, <scene name='pdbsite=CC1:Ndg+Binding+Site+For+Residue+B+2801'>CC1</scene>, <scene name='pdbsite=CC2:Ldy+Binding+Site+For+Residue+B+2900'>CC2</scene>, <scene name='pdbsite=CC3:Mma+Binding+Site+For+Residue+B+2901'>CC3</scene>, <scene name='pdbsite=CC4:Ca+Binding+Site+For+Residue+A+1550'>CC4</scene>, <scene name='pdbsite=CC5:Ca+Binding+Site+For+Residue+B+2551'>CC5</scene>, <scene name='pdbsite=CC6:Gol+Binding+Site+For+Residue+A+1902'>CC6</scene>, <scene name='pdbsite=CC7:Gol+Binding+Site+For+Residue+A+1903'>CC7</scene>, <scene name='pdbsite=CC8:Gol+Binding+Site+For+Residue+B+2902'>CC8</scene> and <scene name='pdbsite=CC9:Gol+Binding+Site+For+Residue+B+2903'>CC9</scene>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LDY:ALPHA-D-LYXOPYRANOSE'>LDY</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Mannosyl-oligosaccharide_1,2-alpha-mannosidase Mannosyl-oligosaccharide 1,2-alpha-mannosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.113 3.2.1.113] </span>
or leave the SCENE parameter empty for the default display.
|GENE= MSDC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5077 Penicillium citrinum])
-->
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01532 Glyco_hydro_47]</span>
{{STRUCTURE_2ri9|  PDB=2ri9 |  SCENE= }}  
|RELATEDENTRY=[[1kkt|1kkt]], [[1kre|1kre]], [[1krf|1krf]], [[2ri8|2RI8]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ri9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ri9 OCA], [http://www.ebi.ac.uk/pdbsum/2ri9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ri9 RCSB]</span>
}}


'''Penicillium citrinum alpha-1,2-mannosidase in complex with a substrate analog'''
'''Penicillium citrinum alpha-1,2-mannosidase in complex with a substrate analog'''
Line 34: Line 31:
[[Category: Yip, P.]]
[[Category: Yip, P.]]
[[Category: Yoshida, T.]]
[[Category: Yoshida, T.]]
[[Category: alternative conformation]]
[[Category: Alternative conformation]]
[[Category: glycoprotein]]
[[Category: Glycoprotein]]
[[Category: glycosidase]]
[[Category: Glycosidase]]
[[Category: hydrolase]]
[[Category: Hydrolase]]
[[Category: modulation of activity]]
[[Category: Modulation of activity]]
[[Category: secreted]]
[[Category: Secreted]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 16:57:25 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:00:43 2008''