3cu9: Difference between revisions

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==High resolution crystal structure of 1,5-alpha-L-arabinanase from Geobacillus Stearothermophilus==
==High resolution crystal structure of 1,5-alpha-L-arabinanase from Geobacillus Stearothermophilus==
<StructureSection load='3cu9' size='340' side='right' caption='[[3cu9]], [[Resolution|resolution]] 1.06&Aring;' scene=''>
<StructureSection load='3cu9' size='340' side='right'caption='[[3cu9]], [[Resolution|resolution]] 1.06&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3cu9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_12980 Atcc 12980]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CU9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CU9 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3cu9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_12980 Atcc 12980]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CU9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CU9 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">abn ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1422 ATCC 12980])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">abn ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1422 ATCC 12980])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Arabinan_endo-1,5-alpha-L-arabinosidase Arabinan endo-1,5-alpha-L-arabinosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.99 3.2.1.99] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Arabinan_endo-1,5-alpha-L-arabinosidase Arabinan endo-1,5-alpha-L-arabinosidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.99 3.2.1.99] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cu9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cu9 OCA], [http://pdbe.org/3cu9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3cu9 RCSB], [http://www.ebi.ac.uk/pdbsum/3cu9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3cu9 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cu9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cu9 OCA], [https://pdbe.org/3cu9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cu9 RCSB], [https://www.ebi.ac.uk/pdbsum/3cu9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cu9 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/IABN_GEOSE IABN_GEOSE]] Involved in the degradation of arabinan and is a key enzyme in the complete degradation of the plant cell wall. Catalyzes the internal cleavage of alpha-(1->5)-L-arabinofuranosyl residues of debranched arabinan, linear arabinan and short arabino-oligosaccharides (degree of polymerization from 2 to 8). It exhibits marginal activity toward sugar beet arabinan.<ref>PMID:19505290</ref>   
[[https://www.uniprot.org/uniprot/IABN_GEOSE IABN_GEOSE]] Involved in the degradation of arabinan and is a key enzyme in the complete degradation of the plant cell wall. Catalyzes the internal cleavage of alpha-(1->5)-L-arabinofuranosyl residues of debranched arabinan, linear arabinan and short arabino-oligosaccharides (degree of polymerization from 2 to 8). It exhibits marginal activity toward sugar beet arabinan.<ref>PMID:19505290</ref>   
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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==See Also==
==See Also==
*[[Arabinanase|Arabinanase]]
*[[Arabinanase 3D structures|Arabinanase 3D structures]]
== References ==
== References ==
<references/>
<references/>
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[[Category: Arabinan endo-1,5-alpha-L-arabinosidase]]
[[Category: Arabinan endo-1,5-alpha-L-arabinosidase]]
[[Category: Atcc 12980]]
[[Category: Atcc 12980]]
[[Category: Large Structures]]
[[Category: Alhassid, A]]
[[Category: Alhassid, A]]
[[Category: David, A Ben]]
[[Category: David, A Ben]]
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