2zim: Difference between revisions

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Bots, Bureaucrats, journal, Administrators
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[[Image:2zim.jpg|left|200px]]
[[Image:2zim.jpg|left|200px]]


{{Structure
<!--
|PDB= 2zim |SIZE=350|CAPTION= <scene name='initialview01'>2zim</scene>, resolution 2.10&Aring;
The line below this paragraph, containing "STRUCTURE_2zim", creates the "Structure Box" on the page.
|SITE= <scene name='pdbsite=AC1:Edo+Binding+Site+For+Residue+A+902'>AC1</scene>, <scene name='pdbsite=AC2:Edo+Binding+Site+For+Residue+A+903'>AC2</scene>, <scene name='pdbsite=AC3:Edo+Binding+Site+For+Residue+A+904'>AC3</scene>, <scene name='pdbsite=AC4:Edo+Binding+Site+For+Residue+A+905'>AC4</scene>, <scene name='pdbsite=AC5:Edo+Binding+Site+For+Residue+A+906'>AC5</scene>, <scene name='pdbsite=AC6:Edo+Binding+Site+For+Residue+A+907'>AC6</scene>, <scene name='pdbsite=AC7:Edo+Binding+Site+For+Residue+A+908'>AC7</scene>, <scene name='pdbsite=AC8:Edo+Binding+Site+For+Residue+A+909'>AC8</scene>, <scene name='pdbsite=AC9:Edo+Binding+Site+For+Residue+A+910'>AC9</scene>, <scene name='pdbsite=BC1:Edo+Binding+Site+For+Residue+A+911'>BC1</scene>, <scene name='pdbsite=BC2:Yly+Binding+Site+For+Residue+A+1'>BC2</scene> and <scene name='pdbsite=BC3:Pop+Binding+Site+For+Residue+A+901'>BC3</scene>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene>, <scene name='pdbligand=YLY:(2R)-2-AMINO-6-({[(2S,3R)-3-METHYLPYRROLIDIN-2-YL]CARBONYL}AMINO)HEXANOYL+[(2S,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+HYDROGEN+(R)-PHOSPHATE'>YLY</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Pyrrolysine--tRNA(Pyl)_ligase Pyrrolysine--tRNA(Pyl) ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.26 6.1.1.26] </span>
or leave the SCENE parameter empty for the default display.
|GENE= pylS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2209 Methanosarcina mazei])
-->
|DOMAIN=
{{STRUCTURE_2zim| PDB=2zim  | SCENE= }}  
|RELATEDENTRY=[[2q7g|2Q7G]], [[2q7e|2Q7E]], [[2q7h|2Q7H]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zim FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zim OCA], [http://www.ebi.ac.uk/pdbsum/2zim PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2zim RCSB]</span>
}}


'''Pyrrolysyl-tRNA synthetase bound to adenylated pyrrolysine and pyrophosphate'''
'''Pyrrolysyl-tRNA synthetase bound to adenylated pyrrolysine and pyrophosphate'''
Line 24: Line 21:
Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation., Kavran JM, Gundllapalli S, O'Donoghue P, Englert M, Soll D, Steitz TA, Proc Natl Acad Sci U S A. 2007 Jul 3;104(27):11268-73. Epub 2007 Jun 25. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17592110 17592110]
Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation., Kavran JM, Gundllapalli S, O'Donoghue P, Englert M, Soll D, Steitz TA, Proc Natl Acad Sci U S A. 2007 Jul 3;104(27):11268-73. Epub 2007 Jun 25. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17592110 17592110]
[[Category: Methanosarcina mazei]]
[[Category: Methanosarcina mazei]]
[[Category: Pyrrolysine--tRNA(Pyl) ligase]]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Kavran, J M.]]
[[Category: Kavran, J M.]]
[[Category: Steitz, T A.]]
[[Category: Steitz, T A.]]
[[Category: aminoacyl-trna synthetase]]
[[Category: Aminoacyl-trna synthetase]]
[[Category: atp-binding]]
[[Category: Atp-binding]]
[[Category: cytoplasm]]
[[Category: Cytoplasm]]
[[Category: ligase]]
[[Category: Ligase]]
[[Category: nucleotide-binding]]
[[Category: Nucleotide-binding]]
[[Category: protein biosynthesis]]
[[Category: Protein biosynthesis]]
[[Category: trna synthetase bound to an adenylated intermediate]]
[[Category: Trna synthetase bound to an adenylated intermediate]]
 
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:20:58 2008''
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