6gpe: Difference between revisions

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==Crystal Structure of the CsiD Glutarate Hydroxylase==
==Crystal Structure of the CsiD Glutarate Hydroxylase==
<StructureSection load='6gpe' size='340' side='right' caption='[[6gpe]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='6gpe' size='340' side='right'caption='[[6gpe]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6gpe]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GPE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GPE FirstGlance]. <br>
<table><tr><td colspan='2'>[[6gpe]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GPE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6GPE FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6gpe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6gpe OCA], [http://pdbe.org/6gpe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6gpe RCSB], [http://www.ebi.ac.uk/pdbsum/6gpe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6gpe ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6gpe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6gpe OCA], [https://pdbe.org/6gpe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6gpe RCSB], [https://www.ebi.ac.uk/pdbsum/6gpe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6gpe ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/CSID_ECOLI CSID_ECOLI]] May be involved in the control of utilization of gamma-aminobutyric acid.[HAMAP-Rule:MF_01083]
[https://www.uniprot.org/uniprot/GLAH_ECOLI GLAH_ECOLI] Acts as an alpha-ketoglutarate-dependent dioxygenase catalyzing hydroxylation of glutarate (GA) to L-2-hydroxyglutarate (L2HG) in the stationary phase of E.coli. Functions in a L-lysine degradation pathway that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. Other dicarboxylic acids (oxalate, malonate, succinate, adipate, and pimelate) are not substrates for this enzyme.<ref>PMID:30498244</ref>
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== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Hartig, J S]]
[[Category: Escherichia coli K-12]]
[[Category: Mayans, O]]
[[Category: Large Structures]]
[[Category: Williams, R M]]
[[Category: Hartig JS]]
[[Category: Alpha-ketoglutarate-dependent]]
[[Category: Mayans O]]
[[Category: Glutarate hydroxylase]]
[[Category: Williams RM]]
[[Category: Hydrolase]]
[[Category: Jelly roll]]