2zbk: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
Line 1: Line 1:
[[Image:2zbk.jpg|left|200px]]
[[Image:2zbk.jpg|left|200px]]


{{Structure
<!--
|PDB= 2zbk |SIZE=350|CAPTION= <scene name='initialview01'>2zbk</scene>, resolution 3.560&Aring;
The line below this paragraph, containing "STRUCTURE_2zbk", creates the "Structure Box" on the page.
|SITE= <scene name='pdbsite=AC1:Rdc+Binding+Site+For+Residue+B+531'>AC1</scene>, <scene name='pdbsite=AC2:Rdc+Binding+Site+For+Residue+D+531'>AC2</scene>, <scene name='pdbsite=AC3:Rdc+Binding+Site+For+Residue+F+531'>AC3</scene> and <scene name='pdbsite=AC4:Rdc+Binding+Site+For+Residue+H+531'>AC4</scene>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=RDC:RADICICOL'>RDC</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA_topoisomerase_(ATP-hydrolyzing) DNA topoisomerase (ATP-hydrolyzing)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.99.1.3 5.99.1.3] </span>
or leave the SCENE parameter empty for the default display.
|GENE= top6A ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2286 Sulfolobus shibatae]), top6B ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2286 Sulfolobus shibatae])
-->
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00223 TOPRIM_TopoIIB_SPO], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam04406 TP6A_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK04342 PRK04342], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK05179 rpsM], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1389 COG1389], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00823 TopoIIB_Trans], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00075 HATPase_c]</span>
{{STRUCTURE_2zbk| PDB=2zbk  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zbk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zbk OCA], [http://www.ebi.ac.uk/pdbsum/2zbk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2zbk RCSB]</span>
}}


'''Crystal structure of an intact type II DNA topoisomerase: insights into DNA transfer mechanisms'''
'''Crystal structure of an intact type II DNA topoisomerase: insights into DNA transfer mechanisms'''
Line 23: Line 20:
==Reference==
==Reference==
Crystal Structure of an Intact Type II DNA Topoisomerase: Insights into DNA Transfer Mechanisms., Graille M, Cladiere L, Durand D, Lecointe F, Gadelle D, Quevillon-Cheruel S, Vachette P, Forterre P, van Tilbeurgh H, Structure. 2008 Mar;16(3):360-70. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18334211 18334211]
Crystal Structure of an Intact Type II DNA Topoisomerase: Insights into DNA Transfer Mechanisms., Graille M, Cladiere L, Durand D, Lecointe F, Gadelle D, Quevillon-Cheruel S, Vachette P, Forterre P, van Tilbeurgh H, Structure. 2008 Mar;16(3):360-70. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18334211 18334211]
[[Category: DNA topoisomerase (ATP-hydrolyzing)]]
[[Category: Protein complex]]
[[Category: Protein complex]]
[[Category: Sulfolobus shibatae]]
[[Category: Sulfolobus shibatae]]
Line 32: Line 28:
[[Category: Lecointe, F.]]
[[Category: Lecointe, F.]]
[[Category: Tilbeurgh, H van.]]
[[Category: Tilbeurgh, H van.]]
[[Category: atp-binding]]
[[Category: YSG, Paris-Sud Yeast Structural Genomics.]]
[[Category: atpase]]
[[Category: Atp-binding]]
[[Category: decatenation]]
[[Category: Atpase]]
[[Category: dna binding protein]]
[[Category: Decatenation]]
[[Category: dna topoisomerase]]
[[Category: Dna binding protein]]
[[Category: dna-binding]]
[[Category: Dna topoisomerase]]
[[Category: drug design]]
[[Category: Dna-binding]]
[[Category: magnesium]]
[[Category: Drug design]]
[[Category: metal-binding]]
[[Category: Magnesium]]
[[Category: nucleotide-binding]]
[[Category: Metal-binding]]
 
[[Category: Nucleotide-binding]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr  2 11:32:34 2008''
[[Category: Paris-sud yeast structural genomic]]
[[Category: Structural genomic]]
[[Category: Ysg]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr  9 14:43:57 2008''